KEGG   Gorilla gorilla gorilla (western lowland gorilla): 101140810
Entry
101140810         CDS       T02442                                 
Symbol
SETX
Name
(RefSeq) probable helicase senataxin isoform X1
  KO
K10706  ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3]
Organism
ggo  Gorilla gorilla gorilla (western lowland gorilla)
Pathway
ggo05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:ggo00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    101140810 (SETX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ggo03021]
    101140810 (SETX)
Enzymes [BR:ggo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     101140810 (SETX)
    5.6.2.5  RNA 5'-3' helicase
     101140810 (SETX)
Transcription machinery [BR:ggo03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     101140810 (SETX)
SSDB
Motif
Pfam: AAA_11 AAA_12 AAA_19 UvrD-helicase AAA_30 AAA_22 ResIII SLFN-g3_helicase Helicase_RecD AAA_16 UvrD_C_2 nSTAND3
Other DBs
NCBI-GeneID: 101140810
NCBI-ProteinID: XP_030870319
Ensembl: ENSGGOG00000027664
LinkDB
Position
13:complement(join(128638393..128639139,128643549..128643635,128643761..128643848,128645697..128645795,128649260..128649424,128651131..128651223,128652130..128652317,128655516..128655623,128657304..128657453,128660469..128660540,128662274..128662389,128662580..128662681,128669891..128670047,128670902..128671069,128672094..128672326,128674638..128674811,128685798..128685897,128700322..128704497,128705050..128705137,128705270..128705441,128708622..128708741,128710305..128710524,128716991..128717100,128720736..128720946,128723723..128723899))
AA seq 2706 aa
MSTCCWCTPGGASTIDFLKRYASNTPSGEFQTADEDLCYCLECVAEYHKARDELPFLHEV
LWELETLRLINHFEKSMKAEIGDDDELYIVDNNGEMPLFDITGQDFENKLRVPLLEILKY
PYLLLHERVNELCVEALCRMEQANCSFQVFDKHPGIYLFLVHPNEMVRRWAILTARNLGK
VDRDDYYDLQEVLLCLFKVIELGLLESPDIYTSSVLEKGKLILLPSHMYDTTNYKSYWLG
ICMLLTILEEQAMDSLLLGSDKQNDFMQSILHTMEREADDDSVDPFWPALHCFMVILDRL
GSKVWGQLMDPIVAFQTIINNASYNREIRHIRNSSVRTKLEPESYLDDMVTCSQIVYNYN
PEKTKKDSGWRTAICPDYCPNMYEEMETLASVLQSDIGQDMRVHNSTFLWFIPFVQSLMD
LKDLGVAYIAQVVNHLYSEVKEVLNQTDAVCDKVTEFFLLILVSVIELHRNKKCLHLLWV
SSQQWVEAVVKCAKLPTTAFTRSSEKSSGNCSKGTAMISSLSLHSMPSNSVQLAYVQLIR
SLLKEGYQLGQQSLCKRFWDKLNLFLRGNLSLGWQLTSQETHELQTCLKQIIRNIKFKAP
PCNTFVDLTSACKISPASYNKEESEQMGKTSRKDMHCLEASSPTFSKEPMKVQDSVLIKA
DNTIESDNNEQNYIKDVKLEDHLLAGSCLKQSSKNIFTERAEDQIKISTRKQKSVKEISS
YTPKDCTSINGPERGCDRGIIVSTRLLTDSSTDALEKVSTSNEDFSLKDDALAKTSKRKT
KVQKDEICAKLSHVIKKQHRKSTLVDNTINLDENLTVSNIESFCSRKDTGVQKGDGFIHN
LSLDPSGVLDDKNGEQKSQNNVLPKEKQLKNEELDIFSSRENNCKIQEFHVDDKELIPFT
EMTNTSEKKSSPFKDLMTVPESRDEEMSNSTSVIYSNLTREQAPDISPKSDTLTDSQIDR
DLHKLSLLAQASVITFPSDSPQNSSQLQRKVKEDKRCFTANQNNVGDTSRGQVIIISDSD
DDDDERILSLEKLTKQDKICLERERPEQHVSTVNSKEEKNPVKEEKTETLFQFEESDSQC
FEFESSSEVFSVWQDHPDDNNSVQDGEKKCLAPIANTTNGQGCTDYVSEVVKKGAGGTGE
HTRPRSISVEEFCEIEVKKPKRKRSEKPMAEDAVRPSSSVRNEGQSDTNKRDLVGNDFKS
IDRRTSTPNSRIQRATTVSQKKSSKLCTCTEPIRKVPVSKTLKKTHSDAKKGQNRSSNYL
SCRTTPAIVPPKKFRQCPEPTSTAEKLGLKKGPRKAYELSQRSLDYVAQLRDHGKTVGVV
DTRRKTKLISPQNLSVRNNKKLLTSQELQMQRQIRPKSQKNRQRLADCESTDVKRAGSHT
AQNSDIFVPESDRSDYNCTGGTEVLATSNRKQLIKCMLSEPETIKAKHGSPATDNACSLN
QCDSVVLNGTIPTNEVIVSTSEDPLGGGDPTARHIEMATLKEGEPDSSSDAEEDNLFLTQ
NDPEDMDLCSQMENDNYKLIELIHGKDTVEVEEDSVSRPQLESLSGTKCKYKDCLETTKN
QGEYCPKHSEVKAADEDVFRKPGLPPPASKPLRRTTKIFSSKSTSRIAGLSKSLETSSAL
SPSLKNKSKGIQSILKVPQPVPLIAQKPVGEMKNSCNVLHPQSPNNSNRQGCKVPFGESK
YFPSSSPVNILLSSQSVSDTFVKEVLKWKYEMFLNFGQCGPPASLCQSISRPVPVRFHNY
GDYFNVFFPLMVLNTFETVAQEWLNSPNRENFYQLQVRKFPADYIKYWEFAVYLEECELA
KQLYPKENDLVFLAPERINEEKKDTERNDIQDLHEYHSGYVHKFRRTSVMRNGKAECYLS
IQTQENFPANLNELVNCIVISSLVTTQRKLKAMSLLGSRNQLARAVLNPNPMDFCTKDLL
TTTSERIIAYLRDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLYRL
LTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGD
INLVRLGPEKSINSEVLKFSLDSQVNHRMKKELPSHVQAMHKRKEFLDYQLDELSRQRAL
CRGGREIQRQELDENISKVSKERQELASKIKEVQGRPQKTQSIIILESHIICCTLSTSGG
LLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMKA
QEYGYDQSMMARFCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLKTN
RQTEAIRCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEIIKLIKDKRKDVSFR
NIGIITHYKAQKTMIQKDLDKEFDRKGPAEVDTVDAFQGRQKDCVIVTCVRANSMQGSIG
FLASLQRLNVTITRAKYSLFILGHLRTLMQLLPRSFCVHVNHSPFFSPEPKYLHWALKEN
QHWNQLIQDAQKRGAIIKTCDKNYRHDAVKILKLKPVLQRSLTHPPTIAPEGSRPQGGLP
SSKLDSGFAKTSVAASLYHTPSDSKEITVTVTSKDPERPPVHDQLQDPRLLKRMGIEVKG
GIFLWDPQPSSPQHPGATPPTGEPGFPVVHQDLSHVQQPAAVVAALSSHKPPVRGEPPAA
SPEASTCQSKCDDPEEELCHRREARAFSEGEQEKCGSESHHTRRNSRWDKRTLEQDDSSS
KKRKLL
NT seq 8121 nt   +upstreamnt  +downstreamnt
atgagcacatgttgttggtgtacgccaggtggtgcttccaccattgacttcctaaagcgc
tatgcttccaacactccctccggtgaatttcaaacagctgacgaagacctctgctactgc
ttggagtgtgtggctgagtaccacaaagcaagagatgaattgccgttcttgcatgaggtt
ttatgggaattagaaaccttacgtctcataaatcactttgaaaaatccatgaaggcagaa
attggagatgatgatgagttatatatagtagacaacaatggagagatgccactgtttgac
atcactgggcaagactttgaaaataagcttcgagttcctcttcttgaaatactgaaatat
ccttacttgcttctacatgaacgtgttaacgagttatgtgttgaagcactttgtcggatg
gaacaagccaattgctcctttcaggtgtttgacaaacatccagggatctatttgttttta
gtccatcccaatgaaatggttcggcgttgggctatcttgactgcaagaaacttggggaaa
gtggacagagatgattattatgacttacaagaagttttactttgcctttttaaagtcatt
gagttggggcttttagagagtccagacatttatacttcttctgtcctagagaagggtaaa
ctgattcttctgccctcacacatgtatgatactaccaactacaaaagctattggttaggt
atttgcatgttgctgaccattcttgaggaacaagccatggattccctgttgttgggctca
gacaaacaaaatgattttatgcaatcgatacttcacactatggagagggaagcagatgat
gatagtgtggatcctttctggccagcgttacactgttttatggtgattctggatcggctt
ggatctaaggtctggggtcaacttatggatcctattgtggcatttcaaaccattatcaac
aacgcaagctacaatagagagatccgacatatacggaacagctctgtaaggaccaagtta
gaaccggagtcctatttggatgatatggtgacttgcagccagattgtatacaattataat
cctgaaaagaccaaaaaggattctggatggagaacagccatttgcccagattattgtcct
aacatgtatgaagaaatggaaacattagccagtgtacttcagtcagatattggtcaagac
atgcgtgttcataacagcacatttctgtggttcatcccttttgtccagtccctcatggat
cttaaggatttgggtgtggcttacatagcacaggttgttaatcatctgtactctgaagtc
aaagaagtcctcaaccaaacagatgctgtgtgtgacaaagtcactgaattttttcttcta
attttggtatcagtgattgaactgcatagaaataaaaaatgtttgcatttgctgtgggta
agttcccagcaatgggtggaagccgtcgttaaatgtgccaaacttcctaccactgcgttt
acacggagttctgagaaatcatctggaaattgctccaaaggaacagcaatgatatcatca
ctgtcgttgcattccatgccatctaactctgtacaacttgcttatgtgcagctgattaga
agtctccttaaagaaggttatcagcttgggcagcagtctctttgcaagcgattctgggat
aagctcaacttattccttagaggaaatttatctctaggttggcagttgactagtcaggaa
acccatgagctacaaacttgcttaaagcaaattattagaaacataaaattcaaagcacct
ccatgtaacacttttgtggatctgacttctgcatgtaaaatctctcctgcatcttataat
aaagaagaaagtgaacaaatggggaagacgtctagaaaagatatgcattgtttggaagct
tccagcccaacattttctaaagaaccaatgaaagtgcaagacagtgtattgatcaaagca
gataacactatagaaagtgacaataatgagcaaaattatataaaggatgtgaaactagaa
gaccatctcttagctgggtcatgcttaaagcagagtagtaaaaacatttttactgaaaga
gctgaagatcaaattaaaataagtacaaggaagcagaagtctgtaaaagagatctcttca
tatacaccaaaggattgtacttcaataaatggtccagaaaggggatgtgacagaggaata
atagtatcaacacgtttgttgactgattctagcactgatgctttggaaaaagtgtccaca
tcaaatgaagatttctctttaaaggatgatgctcttgctaaaacctcaaaacgaaaaact
aaggtacagaaagatgaaatctgtgcaaagttatcacatgtaataaagaagcaacacagg
aagagtactttggtcgataatactatcaatttagatgaaaatttgactgtatctaacatt
gagagtttctgttcaaggaaagacacaggagttcagaaaggagatggtttcatacacaat
ctttctttagaccctagtggtgttctggatgataagaatggagaacaaaaatctcaaaac
aatgtattgccaaaagagaaacaattaaagaatgaagaattagatattttctcttcccgt
gaaaacaattgtaaaatacaggaatttcatgttgatgataaagaattgatcccttttaca
gaaatgaccaatacttcagagaagaaatcatctccctttaaagatcttatgactgtacct
gaatcaagagatgaggagatgagtaatagtaccagtgtgatttattctaacttgacaaga
gaacaggcccctgacatcagtcctaaatctgacaccttaacggattctcagatagacaga
gaccttcacaaattatctttactagctcaagccagtgttattacgttcccatccgattca
cctcagaactcatcgcagctgcaaaggaaagtaaaagaagataaaagatgtttcacagct
aaccaaaataatgttggagatacctcccgtggacaggttattattatttcagattctgat
gatgatgatgatgaaagaatcctgagtcttgagaaactcactaaacaggacaaaatatgc
cttgagagagaacgtccagagcagcacgtttcaacagttaatagtaaggaggaaaagaat
ccagtaaaggaagaaaagacagagactctttttcagtttgaggaatctgattctcagtgt
tttgagtttgaaagttcatctgaagtgttttcagtttggcaagatcatccagacgataat
aattcagttcaagatggtgagaaaaaatgtttggctcctatagccaataccacaaatggt
cagggttgtacagattatgtatctgaagttgttaaaaaaggagcagggggcactggagaa
cacacaagaccacggagtatttctgttgaagaattttgtgaaattgaagtaaaaaagcct
aagagaaaacgatctgaaaaaccaatggctgaagatgctgtgaggccttcatcttctgtc
agaaatgagggccagtctgatactaataagagagatcttgtgggaaatgattttaaaagt
atagatagaaggacttcaactcccaattcacgtattcagagagccactacggtttcacaa
aagaagtcttcaaagctttgtacttgtacagaacccatcaggaaagttccagtttctaag
acccttaagaaaactcattcagatgccaaaaaaggacagaatagaagttcaaattaccta
agttgtagaacaactcctgctatagtgccgccaaagaaatttcgtcagtgtcctgagcca
acttcaacagctgagaaacttggcctgaaaaagggtcctcgtaaggcatatgagttgtcc
cagcggtctttggattatgtagctcaattacgtgatcatggcaaaactgttggagtagtt
gatacccgaagaaagactaaattaatttctcctcagaacctgtctgtcagaaataataag
aaacttctgactagtcaagaacttcagatgcaaaggcagatcagacccaaatcacaaaaa
aatagacaaagacttgctgattgtgaaagtacagatgttaaaagagcagggtcacataca
gcacagaattctgacatatttgtaccagaatctgataggtcagattataattgtacagga
ggaactgaggtactcgccaccagtaacagaaaacagttaataaaatgcatgctgtctgaa
ccagaaaccataaaagcaaaacatgggtctccagcaactgataatgcttgctctttgaac
cagtgtgattctgtagtgttaaatggaacaataccaacaaatgaagtaattgtctctact
tcagaggaccctctgggtggaggtgatccaacagcacgtcatatagagatggcaactttg
aaagagggagagcctgactccagcagtgatgcagaggaagacaacttatttttaacccaa
aatgatcctgaagatatggatttatgttcacaaatggagaatgacaattataaactcatt
gaactaattcatggaaaagatacagttgaggttgaagaagattctgtaagtcggcctcag
ttggaatctttgagtggcacaaagtgtaagtacaaagattgtcttgaaaccacaaaaaac
cagggtgaatactgcccaaaacactctgaagtgaaagcagcagatgaagatgtatttcgt
aaacctggcttgcctcctcctgcatctaaacctttgagacgtaccactaagatttttagc
tcaaagagtacttcacgaattgctggtctttctaaatctttggaaacttcttcagcactt
tcaccgtctctaaaaaataagtcaaaggggatacagtcgattttgaaagtaccacagcca
gttcccctcatagctcagaagccagttggtgaaatgaagaattcgtgcaatgttcttcat
cctcagtctccgaataattccaacaggcaaggttgcaaagttccatttggtgaaagcaaa
tattttccatcttcctctccagtaaacattcttttgtcatcacagtctgtctctgacacc
ttcgttaaagaggtcttaaaatggaaatatgaaatgtttttgaactttggtcagtgtggg
ccccctgcaagtctttgtcagtccatctcaagacctgtgcctgtcagatttcacaattat
ggagattattttaatgtttttttccctttgatggtattgaatacttttgaaacagtggca
caggaatggctcaactctccaaatagagagaatttctatcagttgcaagtacgaaaattt
cctgccgattatataaaatactgggagtttgcagtttatctggaagaatgtgaactggct
aaacagctttatccaaaggaaaacgatttggtgtttttagctcctgagagaataaatgaa
gagaagaaagatacagagagaaatgacatacaagatctccatgaatatcattctggttat
gttcataaatttcgccgcacttcagtcatgcgtaatgggaaagctgagtgttacctttcc
atccagactcaagagaactttccggccaatttaaacgaacttgtgaattgtattgtaatc
agttctctggtaactacacaaaggaagttgaaagccatgtctctgttgggtagtcggaac
caactggctagagctgttctgaatccaaaccctatggacttctgtacaaaagacttactg
actacaacatctgagagaattattgcgtacttaagagatttcaatgaagaccaaaagaaa
gcaatagaaactgcatatgctatggtgaaacactcaccatcagttgccaaaatctgcttg
attcatggaccacctggaacaggaaaatcaaaaactattgttggcctcctctatcgtcta
ctgacagagaaccagaggaaggggcattcagacgaaaactccaatgccaaaatcaaacaa
aaccgtgtccttgtgtgtgcaccttccaatgcagctgttgatgaactcatgaaaaaaatt
atccttgaattcaaagaaaaatgtaaagacaagaagaatcctttaggaaactgtggagat
ataaatttagtacgactgggtccagaaaagtctattaatagtgaggttctaaagttcagt
ttggacagccaagtaaaccacagaatgaaaaaagagttaccttctcatgttcaggcgatg
cataaaagaaaggaatttctagattatcagctggatgagctttcccggcagcgagctcta
tgccgaggtggacgggaaatacagaggcaagaattagatgaaaacatttccaaagtttct
aaggaaaggcaggaacttgcttctaaaattaaagaggttcaaggacgcccacagaaaaca
cagagtatcatcatcttagagtcccatatcatctgctgcacgttgagcacaagtggtggt
ttactacttgagtctgctttccgtgggcaagggggtgtccccttcagctgtgtcattgtt
gatgaggctggacagtcttgtgaaattgagactcttactccactcatccatcgctgcaat
aagctcatcctagtaggagatcctaagcagctccctcccacagtcatctctatgaaagca
caggagtatggctatgaccagtcaatgatggctcgcttctgcagactgctggaagagaat
gtagaacacaacatgatcagcaggctgcccattctacagctcactgttcagtacaggatg
catccagacatatgcctcttcccttctaattatgtttataacagaaacttaaaaacaaat
agacagacagaagccattcgatgttcatcagactggccatttcagccataccttgtgttt
gatgttggagatggttcagaaagacgggataatgactcatatataaatgttcaagaaata
aaactggtgatggaaataattaagcttattaaagacaaaagaaaggatgttagttttcga
aacattggcataataactcattacaaggcccagaagacgatgattcagaaggatttggac
aaagagttcgatagaaaaggaccagcagaagtagatactgtggatgcattccagggtcgg
cagaaggattgtgttattgttacatgtgtcagagcaaatagcatgcaaggttcaattgga
ttcctggcaagtttgcagagattgaatgtcaccatcacacgagccaagtacagccttttc
atcctcggacatttgaggaccctgatgcaacttcttcctaggagcttttgtgtacacgtg
aaccattcgccttttttcagcccagaacccaagtatctgcactgggctctcaaggaaaac
cagcattggaatcagctgattcaggatgctcagaagcgtggtgccattattaagacctgt
gacaaaaactatagacatgatgcagtgaagattctgaaactcaagcctgtgctgcagaga
agtctcactcaccctcctaccatagccccagaggggtccagaccccagggtggtttgccc
agcagcaagctagacagtggatttgccaagacatctgttgctgcttctctataccataca
ccctctgactccaaggaaattactgttactgttacttcaaaggaccctgaaagacctcct
gttcatgaccaacttcaggacccacgactgctgaagaggatgggcattgaggtcaaagga
ggaatattcctttgggatccacaaccctcgagcccccagcatcctggagcaacacctcct
acgggcgagccgggcttccctgtcgttcaccaggacctgagccatgtacagcagcccgct
gctgtagtggctgctctgagcagccacaaacctcccgtgcggggcgaacctccagctgcc
agtcccgaggcttccacatgtcagagcaaatgtgatgacccggaagaggagctctgtcac
aggagagaggccagggctttcagtgaaggggagcaggagaagtgtggttccgagagccat
cacaccaggaggaactctaggtgggacaagaggacactggagcaggacgacagcagttcc
aagaaaagaaagcttttatag

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