KEGG   Gorilla gorilla gorilla (western lowland gorilla): 101141349
Entry
101141349         CDS       T02442                                 
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X2
  KO
K17890  autophagy-related protein 16-1
Organism
ggo  Gorilla gorilla gorilla (western lowland gorilla)
Pathway
ggo04136  Autophagy - other
ggo04140  Autophagy - animal
ggo04145  Phagocytosis
ggo04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:ggo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    101141349 (ATG16L1)
   04140 Autophagy - animal
    101141349 (ATG16L1)
   04136 Autophagy - other
    101141349 (ATG16L1)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    101141349 (ATG16L1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ggo04131]
    101141349 (ATG16L1)
   03029 Mitochondrial biogenesis [BR:ggo03029]
    101141349 (ATG16L1)
Membrane trafficking [BR:ggo04131]
 Autophagy
  Autophagosome formation proteins
   Atg12 conjugation proteins
    101141349 (ATG16L1)
 Others
  Specific organelles associated proteins
   Auto phagosome
    101141349 (ATG16L1)
Mitochondrial biogenesis [BR:ggo03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    101141349 (ATG16L1)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st ATG16 Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 DSE1_N Beta-prop_WDR75_1st Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_VPS8 Beta-prop_EIPR1 Beta-prop_NOL10_N WD40_RFWD3 eIF2A Beta-prop_IFT140_1st NBCH_WD40 CFAP251_N Beta-prop_HPS5 Beta-prop_ACSF4 Beta-prop_WDR19_1st Beta-prop_DCAF12 Tricorn_2nd Beta-prop_NWD2_C ASA1 TolB_like
Other DBs
NCBI-GeneID: 101141349
NCBI-ProteinID: XP_004033426
Ensembl: ENSGGOG00000016433
UniProt: G3SDM6
LinkDB
Position
11:join(135958831..135958945,135963117..135963210,135970139..135970244,135971001..135971074,135971903..135972154,135976984..135977049,135979949..135980035,135980707..135980763,135981660..135981762,135984551..135984656,135988091..135988161,135989666..135989737,135996544..135996664,135996939..135997044,135998811..135998960,135999044..135999091,135999912..136000013,136000913..136001006)
AA seq 607 aa
MSSGLRAADFPRWKRHISEQLRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEK
HDVPNRHEISPGHDGTWNDNQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQRK
DREMQMNEAKIAECLQTISDLETECLDLRTKLCDLERANQTLKDEYDALQITFTALEGKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVIVDETSDHTEETSPVRAISRAATKRLSQPAGGLLDSITNIFGRRSVSSFPVPQDNVDT
HPGSGKEVRVPTTALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKG
SLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDN
ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSES
IVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRV
VFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKGCK
AVLWAQY
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgtcgtcgggcctccgcgccgctgacttcccccgctggaagcgccacatctcggagcaa
ctgaggcgccgggaccggctgcagagacaggcgttcgaggagatcatcctgcagtataac
aaattgctggaaaagtcagatcttcattcagtgttggcccagaaactacaggctgaaaag
catgacgtaccaaacaggcacgagataagtcccggacatgatggcacatggaatgacaat
cagctacaagaaatggcccaactgaggattaagcaccaagaggaactgactgaattacac
aagaaacgtggggagttagctcaattggtgattgacctgaataaccaaatgcagcggaag
gacagggagatgcagatgaatgaagcaaaaattgcagaatgtttgcagactatctctgac
ctggagacggagtgcctagacctgcgcactaagctttgtgaccttgaaagagccaaccag
accctgaaggatgaatatgatgccctgcagatcacttttactgccttggagggaaaactg
aggaaaactacggaagagaaccaggagctggtcaccagatggatggctgagaaagcccag
gaagccaatcggcttaatgcagagaatgaaaaagactccaggaggcggcaagcccggctg
cagaaagagcttgcagaagcagcaaaggaacctctaccagtcgaacaggatgatgacatt
gaggtcattgtggatgaaacttctgatcacacagaagagacctctcctgtgcgagccatc
agcagagcagccactaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttgggagacgctctgtctcttccttcccagtcccccaggacaatgtggatact
catcctggttctggtaaagaagtgagggtaccaactactgccttgtgtgtcttcgatgca
catgatggggaagtcaacgctgtgcagttcagtccaggttcccggttactggccaccgga
ggcatggaccgcagggttaagctttgggaagtatttggagaaaaatgtgagttcaagggt
tccctatctggcagtaatgcaggaattacaagcattgaatttgatagtgctggatcttac
ctcttagcagcttccaatgattttgcaagccgaatctggactgtggatgattatcgatta
cggcacacactcacgggacacagtgggaaagtgctgtctgctaagttcctgctggacaat
gcgcggattgtctcaggaagtcacgaccggactctcaaactctgggatctacgcagcaaa
gtctgcataaagacagtgtttgcaggatccagttgcaatgatattgtctgcacagagcaa
tgtgtaatgagtggacattttgacaagaaaattcgtttctgggacattcgatcagagagc
atagttcgagagatggagctgttgggaaagattactgccctggacttaaacccagaaagg
actgagctcctgagctgctcccgtgatgacttgctaaaagttattgatctccgaacaaat
gctatcaagcagacattcagtgcacctgggttcaagtgcggctctgactggaccagagtt
gtcttcagccctgatggcagttacgtggcggcaggctctgctgagggctctctgtatatc
tggagtgtgctcacagggaaagtggaaaaggttctttcaaagcagcacagctcatccatc
aatgcggtggcgtggtcgccctctggctcgcacgttgtcagtgtggacaaaggatgcaaa
gctgtgctgtgggcacagtattga

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