KEGG   Gorilla gorilla gorilla (western lowland gorilla): 101142153
Entry
101142153         CDS       T02442                                 
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
  KO
K23288  syndetin
Organism
ggo  Gorilla gorilla gorilla (western lowland gorilla)
Brite
KEGG Orthology (KO) [BR:ggo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ggo04131]
    101142153 (VPS50)
Membrane trafficking [BR:ggo04131]
 Protein recycling
  Others
   EARP complex
    101142153 (VPS50)
SSDB
Motif
Pfam: Vps54_N Syndetin_C
Other DBs
NCBI-GeneID: 101142153
NCBI-ProteinID: XP_030868952
Ensembl: ENSGGOG00000022699
LinkDB
Position
6:complement(join(95478566..95478685,95480923..95481112,95483221..95483342,95486923..95487081,95488154..95488250,95495381..95495529,95502757..95502837,95513199..95513320,95525331..95525437,95527657..95527775,95530591..95530767,95533050..95533140,95539341..95539439,95539748..95539842,95541940..95542031,95544740..95544872,95560297..95560437,95563860..95563958,95565322..95565364,95576592..95576674,95577832..95577867,95577948..95578065,95578756..95578826,95579671..95579724,95582309..95582380,95583465..95583587,95597302..95597370,95604739..95604771))
AA seq 964 aa
MQKIKSLMTRQGLKSPQESLSDLGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSVDSFDIVKYELEKLPPVLNLQELEAYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTASASEG
SNMIGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPSKQPVSTSSKTVTLFEQYCSGGNPFEIQANHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDVPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKALDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDID
RPKR
NT seq 2895 nt   +upstreamnt  +downstreamnt
atgcaaaaaatcaaatctctcatgacccgacagggtctgaaaagccctcaagaaagcctc
agtgatcttggtgccatagagagtctccgggtccctggaaaggaagaattcagggaactt
cgagaacagccaagtgaccctcaagctgaacaagagcttattaatagtattgaacaagta
tatttttctgtggattcatttgatattgttaaatatgagctggagaagcttccacctgtt
ctcaatttgcaagaattagaggcgtatagagacaaattgaaacaacagcaagctgcagta
tctaaaaaagtggcagatttaatccttgaaaaacagcctgcttatgtaaaggaacttgaa
agagttacctcattgcagacaggtcttcaattagctgctgttatctgtacaaatgggaga
agacacttgaatattgcaaaggaaggttttactcaagctagtttaggccttcttgcaaat
caaaggaaacgtcagttgctgattggacttctgaaatctctgagaactataaaaacattg
caaagaacagatgtacggttaagtgaaatgctggaggaggaagattatccaggagctatt
cagttgtgccttgaatgtcaaaaagctgccagcacttttaaacattacagttgtataagt
gaactgaattcaaagctgcaagatactttggaacagattgaggaacagctggacgtagct
ctttccaaaatctgcaagaattttgacattaaccattataccaaggttcaacaagcttat
cgacttcttggaaaaacacagacagcaatggatcaacttcatatgcacttcacccaagcc
attcacaacaccgtgtttcaagttgttcttggttatgtggaactatgtgcaggaaacaca
gacacaaaattccaaaagctgcaatataaggatctctgtacacatgttacaccagacagc
tatattccatgccttgcagacctgtgcaaagcactatgggaagttatgctcagctattat
aggactatggaatggcatgaaaagcatgacaatgaggatactgcttcagcttctgaaggg
agtaatatgataggtactgaagaaactaattttgatcgtggctacataaaaaagaaatta
gaacatggacttacacgaatatggcaggatgttcagctaaaagtaaaaacctacttgctt
ggaactgatttgtctatattcaaatatgatgatttcatctttgttttggatataatcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttacaggaatct
attagaaaacaaagtgtcaattatttcaagaattaccatagaacacggctcgatgaactg
agaatgttcttagagaatgagacttgggaactttgtcctgttaagtcaaatttcagcatc
ttgcaacttcatgaatttaaattcatggaacagtctcgctccccatcagtttcacctagt
aaacagccagtctcaacttcttcaaaaacagtgaccttgtttgagcagtactgtagtggt
gggaatccatttgaaattcaggccaaccacaaagatgaagaaacagaagatgtcttagct
tctaatgggtatgaatctgatgaacaagaaaagagtgcctatcaagagtatgacagtgac
agtgatgttcctgaggaactcaaacgagactatgtggatgagcagacaggagatgttcct
gtgaaaagtgtttctcgggaaactctaaaaagcaggaagaaatcagattacagtctaaat
aaagtgaatgcacctatcttaacaaatacaacattgaatgtcataagacttgttggaaaa
tatatgcagatgatgaacattcttaagccaattgcctttgatgttattcatttcatgtct
caactatttgattattacttgtatgcaatatataccttttttggtcggaatgattcattg
gaatcaacaggactcggccttagtagtagtagactaagaacaactctaaacagaatacaa
gaaagccttattgatctagaagtttcagctgatcctactgccacactcacagcagcagaa
gaaagaaaggagaaggtgccaagtccacacctcagtcacctagtggttttgacatctggg
gatacgttgtatgggttggcagaaagagtggtagccacggaatccttggtattcttggct
gaacagtttgagttccttcagccacatctggatgctgtgatgcctgcagtcaaaaagccc
tttcttcagcagttctattctcagacagtgtcaaccgccagtgaactacgcaaaccaatt
tactggattgtagctggtaaagcccttgattatgaacagatgctgcttctcatggctaat
gtgaaatgggatgtaaaagaaattatgtcacagcacaacatatatgtagatgcactatta
aaggaatttgagcagtttaacaggaggctaaatgaagtttctaagagagttcgcataccc
ttgcctgtgtctaatatactttgggaacattgtatacgactggctaatcgaactatcgta
gaaggatatgccaatgtcaagaaatgcagtaatgagggtcgtgccctgatgcaattggat
tttcaacagtttttaatgaaacttgaaaaactaacagatattagacccattcctgataaa
gaatttgtagaaacttatattaaagcttattacctaactgagaatgacatggaacgctgg
atcaaagagcacagggaatattcaacgaagcagctgaccaatctggtgaatgtttgcctg
ggatcccatatcaataagaaagcaagacaaaaacttctagcagctatagatgatatagac
agacctaaaagataa

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