Gorilla gorilla gorilla (western lowland gorilla): 101142826
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Entry
101142826 CDS
T02442
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
ggo
Gorilla gorilla gorilla (western lowland gorilla)
Pathway
ggo03410
Base excision repair
ggo04140
Autophagy - animal
ggo04217
Necroptosis
ggo04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
ggo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101142826 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101142826 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
101142826 (HMGB1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
101142826 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ggo03036
]
101142826 (HMGB1)
03400 DNA repair and recombination proteins [BR:
ggo03400
]
101142826 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ggo04147
]
101142826 (HMGB1)
Chromosome and associated proteins [BR:
ggo03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
101142826 (HMGB1)
DNA repair and recombination proteins [BR:
ggo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
101142826 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
101142826 (HMGB1)
Exosome [BR:
ggo04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
101142826 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
NOA36
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
101142826
NCBI-ProteinID:
XP_018895114
Ensembl:
ENSGGOG00000026764
UniProt:
G3SGE0
LinkDB
All DBs
Position
14:complement(join(44793219..44793395,44794402..44794576,44795073..44795218,44795397..44795546))
Genome browser
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg
caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagatatggcaaaggcggacaaggcccgttatgaaagagaaatgaaaacctatattcct
cccaaaggggagacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctggcctg
tccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcagatgac
aagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatacgaaaaggatattgct
gcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaggag
gaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataa
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integrated database retrieval system
