Gorilla gorilla gorilla (western lowland gorilla): 101144592
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Entry
101144592 CDS
T02442
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X2
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ggo
Gorilla gorilla gorilla (western lowland gorilla)
Pathway
ggo03082
ATP-dependent chromatin remodeling
ggo03250
Viral life cycle - HIV-1
ggo04714
Thermogenesis
ggo05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ggo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101144592 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101144592 (SMARCB1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101144592 (SMARCB1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101144592 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ggo01009
]
101144592 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ggo03021
]
101144592 (SMARCB1)
03036 Chromosome and associated proteins [BR:
ggo03036
]
101144592 (SMARCB1)
Protein phosphatases and associated proteins [BR:
ggo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101144592 (SMARCB1)
Transcription machinery [BR:
ggo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101144592 (SMARCB1)
SWI/SNF complex
101144592 (SMARCB1)
Chromosome and associated proteins [BR:
ggo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101144592 (SMARCB1)
PBAF complex
101144592 (SMARCB1)
SWI/SNF complex
101144592 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
101144592
NCBI-ProteinID:
XP_004063205
Ensembl:
ENSGGOG00000034931
LinkDB
All DBs
Position
23:join(21277278..21277370,21281861..21281972,21283664..21283793,21290764..21290901,21293138..21293265,21306106..21306272,21314544..21314734,21322892..21323023,21323461..21323500)
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AA seq
376 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKRNS
QWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLVPI
RLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQQIESYP
TDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVT
TIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQD
RNTRRMRRLANTAPAW
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgctgagcaagaccttcgggcagaagcccgtgaagttccagctggag
gacgacggcgagttctacatgatcggctccgaggtgggaaactacctccgtatgttccga
ggttctctgtacaagagatacccctcactctggaggcgactagccactgtggaagagagg
aagaaaatagttgcatcgtcacatgatcacggatacacgactctagccaccagtgtgacc
ctgttaaaagcctcggaagtggaagagattctggatggcaacgatgagaagtacaaggct
gtgtccatcagcacagagccccccacctacctcagggaacagaaggccaagaggaacagc
cagtgggtacccaccctgcccaacagctcccaccacttggatgccgtgccatgctccacg
accatcaacaggaaccgcatgggccgagacaagaagagaaccttccccctttgctttgat
gaccatgacccagctgtgatccatgagaacgcatctcagcccgaggtgctggtccccatc
cggctggacatggagatcgatgggcagaagctgcgagacgccttcacctggaacatgaat
gagaagttgatgacgcctgagatgttttcagaaatcctctgtgatgatctggatttgaac
ccactgacatttgtgccagccatcgcctctgccatcagacagcagatcgagtcctacccc
acggacagcatcctggaggaccagtcagaccagcgcgtcatcatcaagctgaacatccat
gtgggaaacatttccctggtggaccagtttgagtgggacatgtcagagaaggagaactcg
ccagagaagtttgccctgaagctgtgctcggagctggggttgggcggggagtttgtcacc
accatcgcatacagcatccggggacagctgagctggcatcagaagacctacgccttcagc
gagaaccctctgcccacagtggagattgccatccggaacacgggcgatgcggaccagtgg
tgcccactgctggagactctgacagacgctgagatggagaagaagatccgcgaccaggac
aggaacacgaggcggatgaggcgtcttgccaacacagccccggcctggtaa
DBGET
integrated database retrieval system
