KEGG T02442: 101145208

Gorilla gorilla gorilla (western lowland gorilla): 101145208

Entry

101145208         CDS       T02442

Symbol

KDM4B

Name

(RefSeq) lysine-specific demethylase 4B isoform X1

K06709

[histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]

Organism

ggo Gorilla gorilla gorilla (western lowland gorilla)

Brite

KEGG Orthology (KO) [BR:ggo00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ggo03036]
    101145208 (KDM4B)
Enzymes [BR:ggo01000]
1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     101145208 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     101145208 (KDM4B)
Chromosome and associated proteins [BR:ggo03036]
Eukaryotic type
  Histone modification proteins
   Histone demethylases
    101145208 (KDM4B)

SSDB

Motif

Pfam:

JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD LBR_tudor DUF7141 SLX1_C

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

20:join(10823262..10823402,10830205..10830380,10831524..10831638,10837604..10837797,10861046..10861095,10866745..10866848,10871747..10871884,10900767..10900963,10909274..10909375,10909809..10910008,10921329..10921798,10922156..10922276,10924146..10924324,10925598..10925820,10927529..10927605,10927888..10927943,10928229..10928337,10934259..10934444,10934540..10934704,10935088..10935207,10940674..10940766,10941635..10941811)

AA seq 1130 aa
MGSEDHGAQNPSCKIMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTY
DDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLER
KYWKNLTFVSPIYGADISGSLYDDDVAQWNIGSLRTILDMVERECGTIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLR
HKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKVATQCTCRKDMVKISMDVFVRILQPERYELWKQGKDLTVLDHTRPTALTSPELSSWSA
SRASLKAKLLRRQISLKENRHWRKTEEERKPSLERKKEQTKRPGLSSHRKRSQPKKPKPE
DPKFPGEGTAGAALLEEAGGSVKEEAGPEVDPEEEEEEPQPLPHGREAEGTEEDGRGKLR
PTKAKSERKKKSFGLLPPQLPPPPAHFPSEEALWLPSPLEPPVLGPGPAATEESPLPAPL
NVVPPEVPSEELEAKPRPIIPMLYVVPRPGKAAFNQEHVSCQQAFEHFAQKGPTWKEPVS
PMELTAPEDGAASSGAGRMETKARAGEGQAPSTFSKLKMEIKKSRRHPLGRPPTRSPLSV
VKQEASSDEEASPFSGEEDVSDPDALRPLLSLQWKNRAASFQAERKFNAAAARTEPYCAI
CTLFYPYCQVLQTEKEAPTASLGEGCSATLPSKSRQKTRPLIPEMCFTSGGENTEPLPAN
SYIGDDGTSPLIACGKCCLQVHASCYGIRPELVNEGWTCSRCAAHAWTAECCLCNLRGGA
LQMTTDRRWIHVICAIAVPEARFLNVIERHPVDISAIPEQRWKLKCVYCRKRMKKVSGAC
IQCSYEHCSTSFHVTCAHAAGVLMEPDDWPYVVSITCLKHKSGGHAVQLLRAVSLGQVVI
TKNRNGLYYRCRVIGAASQTCYEVNFDDGSYSDNLYPESITSRDCVRLGPPSEGELVELR
WTDGNLYKAKFISSVTSHIYQVEFEDGSQLTVKRGDIFTLEEELPKRVRSRLSLSTGAPQ
EPAFSGEEAKAAKRPRVGTPLATEDSGRSQDYVAFVESLLQAQGRPGAPF

NT seq 3393 nt +upstreamnt +downstreamnt
atggggtctgaggaccacggcgcccagaaccccagctgtaaaatcatgacgtttcgccca
accatggaagaatttaaagacttcaacaaatacgtggcctacatagagtcgcagggagcc
caccgggcgggcctggccaagatcatccccccgaaggagtggaagccacggcagacgtat
gatgacattgacgacgtggtgatcccggcgcccatccagcaggtggtgacgggccagtcg
ggcctcttcacgcagtacaatatccagaagaaggccatgacagtgggcgagtaccgccgc
ctggccaacagcgagaagtactgtaccccgcggcaccaggactttgacgaccttgaacgc
aaatactggaagaacctcacctttgtctccccgatctacggggctgacatcagtggctct
ttgtatgatgacgacgtggcccagtggaacatcgggagtctccggacgatcctggacatg
gtggagcgcgagtgcggcaccatcatcgagggcgtgaacacgccctacctgtacttcggc
atgtggaagaccaccttcgcctggcacaccgaggacatggacctgtacagcatcaactac
ctgcacttcggggagcctaagtcctggtacgccatcccgccagagcacggcaagcgcctg
gagcggctggccatcggcttcttccccgggagctcgcagggctgcgacgccttcctgcgg
cataagatgaccctcatctcgcccatcatcctgaagaagtacgggatccccttcagccgg
atcacgcaggaggctggagaattcatgatcacatttccctacggctaccacgccggcttc
aatcacgggttcaactgcgcagaatctaccaacttcgccaccctgcggtggattgactac
ggcaaagtggccactcagtgcacgtgccggaaggacatggtcaagatctccatggacgtg
ttcgtgcgcatcctgcagcccgaacgctacgagctgtggaagcagggcaaggacctcacg
gtgctggaccacacgcggcccacggcgctcaccagccccgagctgagctcctggagtgcg
tcccgggcctcgctgaaggccaagctcctccgcagacaaattagtctgaaagaaaacaga
cactggagaaagactgaggaggagaggaaaccaagtctagaaaggaagaaagagcagacc
aaaaggccggggctgtcgtctcaccggaaacggagccagcccaagaagccgaagcccgaa
gaccccaagttccctggggagggtacggctggggcagcgctcctagaggaggctgggggc
agcgtgaaggaggaggctgggccggaggttgaccccgaggaggaggaggaggagccgcag
ccactgccacacggccgggaggccgagggcacagaagaggacgggaggggcaagctgcgg
ccaaccaaggccaagagcgagcggaagaagaagagcttcggcctgctgcccccgcagctg
ccgcccccgcctgctcacttcccctcagaggaggcgctgtggctgccatccccactggag
cccccggtgctgggcccgggccctgcggccacggaggagagccccctgccggcgcccctt
aatgtcgtgccccctgaggtgcccagtgaggagctagaggccaagcctcggcccatcatc
cccatgttgtacgtggtgccgcggccaggcaaggcagccttcaaccaggagcacgtgtcc
tgccagcaggcctttgagcactttgcccagaagggtccgacctggaaggaaccagtttcc
cccatggagctgacggcgccagaggacggtgcagccagcagtggggcgggtcgcatggag
accaaagcccgggccggagaggggcaggcaccgtccacattttccaaattgaagatggag
atcaagaagagccggcgccatcccctgggccggccgcccacccggtccccactgtcggtg
gtgaagcaggaggcctcaagtgacgaggaggcatcccctttctccggggaggaagatgtg
agtgacccggacgccttgaggccgctgctgtctctgcagtggaagaacagggcggccagc
ttccaggccgagaggaagttcaacgcagcagctgcgcgcacggagccctactgcgccatc
tgcacgctcttctacccctactgccaggtcctacagactgagaaggaggcgcccacagcc
tccctcggagagggctgctcagccacattaccctccaaaagccgtcagaagacccgaccg
ctcatccccgagatgtgcttcacctctggtggtgagaacacggagccgctgcccgccaac
tcctacatcggcgacgacgggaccagccccctgatcgcctgcggcaagtgctgcctgcag
gtccatgccagttgctatggcatccgtcccgagctggtcaatgaaggctggacgtgttcc
cggtgcgcggcccacgcctggactgcggagtgctgcctgtgcaacctgcgaggaggtgcg
ctgcagatgaccaccgataggaggtggatccacgtgatctgtgccatcgcagtccccgag
gcgcgcttcctgaatgtgattgagcgccaccctgtggacatcagcgccatccccgagcag
cggtggaagctgaaatgcgtgtactgccggaagcggatgaagaaggtgtcgggtgcctgt
atccagtgctcctatgagcactgctccacgtctttccacgtgacctgcgcccacgccgct
ggcgtgctcatggagccggacgactggccctacgtggtctccatcacctgcctcaagcac
aagtcggggggtcacgctgtccagctcctgagggccgtgtccctaggccaggtggtcatc
accaagaaccgcaatgggctgtactaccgctgtcgcgtcatcggtgccgcctcgcagacc
tgctacgaagtgaacttcgacgatggctcctacagcgacaacctgtaccccgagagcatc
acgagtagggactgtgtccggctgggacccccttccgagggggagctggtggagctccgg
tggactgacggcaacctctacaaggccaagttcatctcctccgtcaccagccacatctac
caggtggagtttgaggacgggtcccagctgacggtgaagcgtggggacatcttcaccctg
gaggaggagctgcccaagagggtccgctctcggctgtcactgagcacgggggcaccgcag
gagcccgccttctcgggggaggaggccaaggccgccaagcgcccgcgtgtgggcaccccg
cttgccacggaggactccgggcggagccaggactacgtggccttcgtggagagcctcctg
caggcgcagggccggcccggagcccccttctag

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