KEGG   Gorilla gorilla gorilla (western lowland gorilla): 101146526
Entry
101146526         CDS       T02442                                 
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1 isoform X1
  KO
K01148  poly(A)-specific ribonuclease [EC:3.1.13.4]
Organism
ggo  Gorilla gorilla gorilla (western lowland gorilla)
Pathway
ggo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ggo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101146526 (PNLDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ggo03019]
    101146526 (PNLDC1)
Enzymes [BR:ggo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     101146526 (PNLDC1)
Messenger RNA biogenesis [BR:ggo03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     101146526 (PNLDC1)
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 101146526
NCBI-ProteinID: XP_018884592
Ensembl: ENSGGOG00000014077
UniProt: G3RTT7
LinkDB
Position
5:join(184030819..184030894,184031284..184031341,184031622..184031695,184033789..184033828,184034483..184034606,184035067..184035155,184036501..184036601,184039264..184039340,184039539..184039682,184040551..184040620,184042224..184042309,184044108..184044163,184046479..184046543,184047034..184047087,184047606..184047648,184049055..184049154,184049446..184049621,184049755..184049853,184050956..184051019)
AA seq 531 aa
MDVGADEFEESLPLLQELVQEADFVGLDIEFTGLRSNLSGPQQISLFDLPSEWYLKTRQS
VQQFTVCQIGLSVFSAIEGEANKYIAHSCNFYLFPTTFGILDSEFSFQASSVQFLNQYGF
NYNKFLKNGIPYMNEEQEKKIRHDILTGNWRVRSSPDKHQIKVVIDEVTRWLDLAKEGDW
MTLPGITGFQAFEVQLVLRQALPNIWTVLKDEGVVVKKVSKQHRWYLQNTSCDRESCWKE
NILLSARGFSVFFQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYDQFKQNIHSLFPV
LIDTKSVTKDIWKEMNFPRVSNLSEVYEVLNSDLNPTKNSGPEIVHASRCEKYVETKCPH
EAAYDAFLCGSVLLKVAHLLLQKIYRIDPVPESSFPQYLDVLAPYVNQVNLIRAGVPKIN
FSGPDYPSIRPPILILSVKRWPGVSEQQVYHKFQNLCKFDVRRLTRSQFLLLTNKFKDAR
NILKEYRDHPTLCISPYRYWRHSPNVNCLLQVCGIVTAWALLAFILGRSGP
NT seq 1596 nt   +upstreamnt  +downstreamnt
atggacgtgggcgccgacgagttcgaggagagcctccctctgctgcaggagctcgtccag
gaggccgacttcgtgggtctggacatagagttcacgggccttcgttctaacctgtctggg
ccccagcagatcagtctttttgatttgccatcggagtggtatctaaagacccgtcagagt
gttcagcaatttacagtctgtcagattggattgtctgtgttttccgctattgaaggagag
gcaaacaagtatatagcccattcgtgtaacttctatctcttccctacaacgtttgggatt
ttggactcagaattctccttccaggcttccagtgttcagtttttgaatcagtatggcttc
aactataacaagtttctcaaaaacggaatcccatatatgaatgaagaacaggagaagaaa
attagacacgatatcctgactgggaactggagagttcgcagctctccggataaacaccaa
atcaaggtggtgattgacgaagtgacgcggtggctggacctggccaaggaaggcgactgg
atgactcttcctgggatcactggcttccaggcctttgaggtccaactggtgctgaggcag
gccctccccaacatctggacggtgctgaaagatgagggggtggtagtgaagaaagtgagt
aaacaacatcgttggtatcttcagaacacctcttgtgaccgagagagctgttggaaggaa
aatattcttctctcagcaaggggtttttctgtctttttccaaatgctggtgaaagcccag
aagcccttagtgggacataatatgatgatggacctgctgcacctccatgagaagttcttc
agacccctcccagaaagctacgatcaatttaagcagaatatccacagcctatttcctgtt
ctcattgataccaagagcgtaacaaaggatatctggaaggagatgaatttcccgagggtg
tcgaatctttccgaagtctatgaagtcctgaacagtgacttgaatcccaccaagaattct
ggaccagagattgttcacgcgagcaggtgtgagaaatatgttgagacaaagtgcccccac
gaagccgcgtatgatgccttcctctgtgggtcagttcttttgaaagtggcacacttgctt
ctacagaagatataccgcatcgaccccgtgcccgagtcatcctttcctcagtaccttgac
gtgctggctccttatgtgaaccaagtgaacctcatccgagcgggggtcccgaagatcaat
ttttctggtccagattatcccagtatccgacctcccatcctcatcctcagcgtcaaaagg
tggcctggggtcagcgagcagcaagtctaccataagtttcagaatctctgcaagtttgat
gtcaggcgactcaccagaagccagttcttactcctgaccaataagtttaaggatgcgcgg
aacatcctgaaggagtaccgggaccacccgaccctgtgcatctccccgtaccgctactgg
aggcactccccaaacgtcaactgcctgctccaagtctgtggcatagtgactgcctgggcc
cttctcgcgttcatccttggaagatctggtccctga

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