Gorilla gorilla gorilla (western lowland gorilla): 101146965
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Entry
101146965 CDS
T02442
Symbol
SYNPO2
Name
(RefSeq) synaptopodin-2 isoform X1
KO
K24066
synaptopodin-2
Organism
ggo
Gorilla gorilla gorilla (western lowland gorilla)
Pathway
ggo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ggo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101146965 (SYNPO2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ggo04990
]
101146965 (SYNPO2)
Domain-containing proteins not elsewhere classified [BR:
ggo04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
101146965 (SYNPO2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
Calsarcin
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
101146965
NCBI-ProteinID:
XP_004040368
Ensembl:
ENSGGOG00000012942
UniProt:
A0A2I2Z7V2
LinkDB
All DBs
Position
3:join(139053849..139053953,139187834..139187985,139191030..139191841,139194237..139196419,139221462..139221995)
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AA seq
1261 aa
AA seq
DB search
MGTGDFICISMTGGAPWGFRLQGGKEQKQPLQVAKIRNQSKASGSGLCEGDEVVSINGNP
CADLTYPEVIKLMESITDSLQMLIKRPSSGISEALISENENKNLEHLTHGGYVESTTLQI
RPATKTQCTEFFLAPVKTEVPLAENQRSGPDCAGSLKEETGPSYQRAPQMPDSQRGRVAE
ELILREKVEAVQPGPVVELQLSLSQERHKGASGPLVALPGAEKSKSPDPDPNLSHDRIVH
INSIPTNEKADPFLRSSKIIQISSGRELRVIQESEAGDAGLPRVEVILDCSDRQKTEGCR
LQAGKECVDSPVEGGQSEAPPSLVSFAVSSEGTEQGEDPRSEKDHSRPHKHRARHARLRR
SESLSEKQVKEAKSKCKSIALLLTDAPNPNSKGVLMFKKRRRRARKYTLVSYGTGELERE
ADEEEEGDKEDTCEVAFLGASESEVDEELLSDVDDNTQVVNFDWDSGLVDIEKKLKRGDK
MEMLPDTTGKGALMFAKRRERMDQITAQKEEDKVGGTPSREQDAAQTDGLRTTTSYQRKE
EESVRTQSSVSKSYIEVSHGLGHVPQQNGFSGASETANIQRMVPMNRTAKPFPGSVNQPA
TPFSPTRNMTSPVADFPAPPPYSAVTPPPDAFSRGVSSPIAGPAQPPPWPQPAPWSQPAF
YDSSERIASRDERISVPAKRTGILQEAKRRSTTKPMFTFKEPKVSPNPELLSLLQNSEGK
RGTGAGGDSGPEEDYLSLGAEACNFMQSSSAKQKTPPPVAPKPAVKSSSSQPVTPVSPVW
SPGVAPTQPPAFPTSNPSKGTVVSSIKIAQPSYPPARPASTLNVAGPFKGPQAAVASQNY
TPKPTVSTPTVNAVQPGAVGPSNELPGMSGRGAQLFAKRQSRMEKYVVDSDTVQAHAARA
QSPTPSLPASWKYSSNVRAPPPVAYNPIHSPSYPLAALKSQPSAAQPSKMGKKKGKKPLN
ALDVMKHQPYQLNASLFTFQPPDAKDGLPQKSSVKVNSALAMKQALPPRPVNAASPTNVQ
ASSVYSVPAYTSPPSFFAEASSPVSASPVPVGIPTSPKQESASSSYFVAPRPKFSAKKSG
VTIQESGHSLSVPGRSVPPTISTSPWVYQPTYSYSGKPTDGLEKANKRPTPWEAAAKSPL
GLVDDAFKPRNIQESIVANVVSAARRKVLPGPPEDWNERLSYIPQTQKAYMGSCGRQEYN
VTANNNMSPNSQYGSQLPYAYYRQASRNDSEIMSMETRSDYCLPVADYNYNPHPRGWRRQ
T
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgggcacaggggattttatctgcatttccatgactggaggggcgccctgggggttcaga
ttgcaaggtggcaaggagcagaagcagcccttacaagttgcaaagattcgaaatcagagc
aaagcctctgggtctgggctctgtgagggagatgaagtggtttccatcaatggcaaccct
tgtgcagatctcacctaccctgaagtcatcaagctcatggaaagcataacagactctctc
caaatgctcatcaaaagaccatccagtggaataagtgaggctttgatatctgaaaatgaa
aacaaaaacctcgagcatctcacacatgggggttatgtggaaagtaccaccctgcagatt
cgaccggccacaaagacccagtgcacagaattcttcctcgcccctgtcaagactgaagtt
cccctagctgagaaccaaagaagtggtcccgactgtgcaggcagcttgaaagaagaaaca
ggcccgagctaccaaagggctccccaaatgcctgactcccaaagaggacgcgtggcagaa
gagctgatcttaagggagaaggtagaagcggtacagcctgggcctgtggttgagctgcaa
ctgtccctttcacaggagagacataagggcgctagtggccctttagtggctctcccggga
gctgaaaaatctaagtctcctgacccagaccctaacttgtcacatgacaggattgtccac
ataaattcgatccctactaatgagaaagcagaccctttcctgaggtccagcaagataatc
cagatctccagtggcagagagttgagagtgatccaggaaagtgaagcaggagatgcggga
ctgccccgggtggaagtaatcctcgactgctctgacaggcagaagacagaagggtgcagg
cttcaggcaggaaaggagtgtgtggattccccagtggaaggagggcagtcagaagcacct
ccttctctggtatcctttgccgtctcatcagaaggcacagagcagggagaagatccacgc
tcggaaaaagatcacagcagacctcacaagcaccgagcgcggcatgcacggctcaggagg
agtgaaagcctgtcagaaaaacaagtgaaggaagcaaaatctaaatgcaaaagcattgcc
cttcttctaacggatgctcccaaccccaactccaagggggtgttgatgtttaagaagcga
cgtcggagggccaggaaatacaccctagttagctacggtactggcgagcttgagcgagag
gcggacgaggaggaagaaggtgacaaggaggatacatgtgaagtagcatttcttggtgca
agcgaatcagaggtggatgaagagttattgtctgacgttgacgacaacacacaagttgtg
aactttgactgggattctggactggtggacattgaaaagaaactgaagagaggggacaag
atggagatgttaccagacaccacaggcaagggagccctcatgtttgccaagaggagggag
agaatggatcagatcacagcccaaaaagaagaggacaaggtaggtggaacgccaagcaga
gaacaagatgctgcccagaccgatggcctgagaaccacgacttcttaccaaagaaaggag
gaagagtcggtaagaacgcagagctctgtgagcaaaagctacatcgaggtgagtcatggt
cttggccatgttccccaacagaatggcttcagtggggcatctgagacagcaaacatccag
aggatggtccccatgaatagaacggccaaacccttcccagggtctgtgaatcagccagct
acccccttctcgccaacccgaaacatgacgagtcccgttgctgactttcctgcacctcca
ccttactctgcagtcactcctccccctgacgccttctccagaggggtttcaagtccgatt
gctggcccagcacagccccctccatggccccagcctgccccgtggtcccagccagccttt
tacgattcgtctgagcgaatagcttcccgagatgagaggatctcagtgccagcaaaaaga
acaggaatattgcaggaggccaaaaggagaagcacgacaaaacccatgtttacttttaaa
gagcccaaagtaagcccaaatcctgaactcttgtcactccttcaaaattcagaaggcaaa
cggggcactggagctggaggtgattccggaccggaagaagactacctcagcttgggggca
gaggcttgtaatttcatgcaaagctcctctgccaaacaaaagacccctcctcctgttgct
ccaaaacctgcagtcaagtcctcatcctcccaaccagtaactccagtttccccagtctgg
tctccaggagtggctcccacccaacctcctgccttccccacatccaacccatcaaagggc
accgttgtctcctccatcaaaatagcccagccttcttaccctcctgcccggcctgcaagt
actttgaacgtggctggtcccttcaaaggaccacaagcagcagtagccagtcagaattac
acacccaaaccaacagtttccacaccaacagtcaatgctgttcagcctggtgcagtggga
ccatccaatgagcttccaggaatgagtgggagaggagctcagctctttgctaaaaggcag
tcgagaatggagaagtatgtggtcgattcagacacggtgcaggcccacgctgctcgagct
cagtctcccactccatctctcccggccagttggaagtactcctccaatgtccgagcacct
cctcctgtggcctataatcctatccactcgccgtcttacccactggctgctctcaagtct
cagccatcagctgcacagccctccaaaatgggcaagaaaaagggaaagaaacccctcaat
gcattagatgtcatgaagcaccaaccgtatcagctcaatgcatccttgtttactttccaa
cctccagatgcaaaggatggcctcccccagaagtcgtcagtcaaggtcaattcagccctg
gccatgaagcaagctcttcctccccggccagtgaatgctgcctcacctacgaatgtgcag
gcttcgtcagtgtactcggtaccagcctatacctctcctccttccttctttgcagaggcc
tcctcaccagtcagtgcatccccagtgcctgtgggcattcccacctcgccaaagcaagaa
tcagcctcatcatcttattttgtggcaccaaggccaaagttctcagccaagaaaagtggt
gtcacaattcaggagagtgggcactccctttctgttcctggaagatcagtcccacccacc
atttctacatctccttgggtataccagcctacttatagttactctggtaaaccaactgat
ggactagagaaagcaaacaagagaccaactccttgggaagcagcagcaaagtctcctctc
ggtctagtggatgatgctttcaaacccagaaacatccaggaatccattgtggcaaatgtg
gtctcagcagctcggaggaaggtgcttccagggcctccagaggattggaatgaaagactg
tcctatattcctcaaacccagaaggcctatatgggctcatgtggaaggcaagagtataat
gtcacagccaataataatatgtcccccaactcccaatatggttcacagttgccatatgca
tattataggcaggcttcaagaaatgattccgaaatcatgtccatggaaaccaggtctgat
tactgtcttccagtagctgattacaactacaacccacacccaaggggatggagacgccaa
acatga
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