KEGG   Gorilla gorilla gorilla (western lowland gorilla): 101148591
Entry
101148591         CDS       T02442                                 
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X2
  KO
K28108  shortage in chiasmata 1
Organism
ggo  Gorilla gorilla gorilla (western lowland gorilla)
Brite
KEGG Orthology (KO) [BR:ggo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ggo03036]
    101148591 (SHOC1)
Chromosome and associated proteins [BR:ggo03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    101148591 (SHOC1)
SSDB
Motif
Pfam: DUF5587
Other DBs
NCBI-GeneID: 101148591
NCBI-ProteinID: XP_030870041
Ensembl: ENSGGOG00000000911
LinkDB
Position
13:complement(join(107929566..107929666,107934330..107935290,107936575..107936724,107937011..107937142,107942740..107942833,107944892..107945013,107946686..107946797,107948043..107948160,107949363..107949541,107950649..107950718,107955891..107955963,107957231..107957409,107960965..107961069,107965203..107965379,107966588..107966707,107970430..107970846,107981095..107981337,107986953..107987047,107991711..107991819,107993572..107993679,108004224..108004377,108005983..108006094,108006595..108006748,108023825..108024009,108028967..108029031))
AA seq 1444 aa
MTDTSVLDQWKASFFVEDFLEKKTITRMVTQINCEFEEVVPSSNPDSQIEVEEVSLYTHV
DYNEVFTPVSCLEKCSALQNQTQDLFIDDKGILFVSNRKHLPTLPTLLSRLKLFLVKDPL
LDFKGQIFTEANFSRECFSLQETLEAFVKEDFCMDKVNFCQEKLEDTICLNEPSSFLIEY
EFLIPPSLKPEIDIPSLSELKELLNLVPEIINYVDEKEKLFERDLTNKHGIEDIGDIKFS
STEILTIQSQSEPEECSKLGELEMPLTPLFLTCQHSSVNSLRTELQTFPLSPVCKINLLT
AEESANEYYMMWQLERCRSPLNPFLLTVPRIQEPHSQYSVTDLKKIFSVKEESLVINPEK
AEWWKQAGLNLKMMETLEHLNTYLCHDNLSSNDTKIEIFLPTKVLQLESCLEHKSHSSPI
ALIDEKSINAHLSLPQKSPSLAKEVPDLCFSDDYFSDKGAAKEEKPKNDQEPVNRIIQKK
ENNDHFELDCTGLSIKSPSSSIIKKASFEHGKKQENDLDLLSDFIMLRNKYKTCTSKTEV
TNSDEKHDKEACSLTLQEESPIVHINKTLEEINRERGTDNVIEIQASDSQCQAFCLLKAA
ASPILKNLVSLCTLPTANWKFATVIFDQTRFLLKEQEKVVSDAVHQGTIDEREMTFKHAA
LLHLLVTIRDVLLTCSLDTALGYLSKAKDIYNSILGPYLGDIWRQLEIVQFIRGKKPETN
YKIQELQCQILSWMQSQQQIKVLIIIRMDSDGEKHFLIKILNKIEGLTLTVLHSNERKDF
LESEGVLKGTSSCVVVHNQYIGADFPWSKFSFVVEYNYVEDSCWTKHCKELNIPYTAFKV
IVPDTVLERSTLLDRFGGFLLEIQIPYVFFASEGLLNTPDILQLLESNYNISLVERGCSE
SLKLFGSSERYVVVTIDEHTAIILQDLEELNCEKASDNIIMRLMALSLQYRYCWIILYTK
ETLNSEYPLTEKTLHHLALIYAALVSFGLNSEELDVKLIIAPGVEATALIIRQIADNSLM
TSKRDPHEWLDKSWLKVSPSEEEMYLLDFPCINPLVAQLMLNKGPSLHWILLATLCQLQE
LLPEVPEKVLKHFCSITSLFKISSSSITKSPQISSPQENRNQISTSSSQSLASDLDSVIQ
EHNEYYQYLGLGETVQEDKTTTLNDNSSIMELREISSFLPPVTSYNQTSYWKDSSCKPNI
GQNTRFLINIESRRPACNSFLNHSDSESDVFSLGLTQMNCETIKSPTDTQKRVSVVPRFI
NSQKRRTHEAKGFINKDVSDPIFSLEGTQSPLHWNFKKNVWEQENHPFNLQYGAQQTACN
KLYSQKGNLFTDQQKCLSDESEGLTCESSKDETFWRELPSVPSLDLFRASDSNANQKEFN
SLYFYQRAGKSLGQKRHHESSFNSGDKESLTGFMYSQLPQFKKRRLAYEKVPGRVDGQTR
LRFF
NT seq 4335 nt   +upstreamnt  +downstreamnt
atgacagatacctcagtcttggaccaatggaaagcaagtttctttgtggaggatttcctt
gagaaaaaaacaattacaagaatggtgacccagattaattgtgaatttgaggaagttgtt
ccaagttcaaatccagactcccaaattgaagtagaggaggtcagtttatacacccacgtg
gactacaatgaagtctttacccctgtcagttgtttagaaaaatgttcagcacttcaaaac
cagacccaagatttatttattgatgataaaggaatactttttgtaagtaatagaaaacac
ctaccaactttgcctactctcttgagtagactaaaactgtttttggtaaaggatcctctt
ttagatttcaaaggacagatcttcacagaagctaatttttccagggaatgtttctctctt
caagaaactttggaagcttttgtgaaagaagatttttgtatggataaagtgaacttttgt
caagagaaactagaagatacaatatgtttaaatgagccatcaagttttcttattgagtat
gaattcttaatacctccaagcctcaaaccagaaattgatattccatcactctcagaactg
aaggagttattaaacctagtgccagaaataataaactatgtagatgaaaaggaaaagctt
tttgaaagagatcttactaacaagcatggaattgaggatatcggggatataaaattcagc
tccacagagattttgaccattcaaagccagagtgaaccagaagagtgcagtaaactagga
gagttagaaatgccactaactcctctattcctaacatgccaacattcttcagtgaattca
ttacgtacagaacttcagacatttccattatctccggtttgtaaaattaatttgcttact
gctgaagaatcagctaatgaatactacatgatgtggcaattagaaagatgtagaagccct
ttgaacccatttttgcttacagtgccaagaattcaagagccccacagccaatattcagtt
acagatttgaaaaagatattttctgttaaagaagaaagccttgtgattaatccggaaaag
gcagagtggtggaaacaagcaggactaaatctgaaaatgatggaaacattggaacatctg
aatacatatttatgtcatgataatttgtcttctaatgacactaaaattgagatatttttg
cctacgaaagtgcttcaattagaatcatgtctagaacataaaagtcattcttcacctatt
gcacttattgatgaaaaatctataaatgctcatttatcacttccacaaaagagtccatct
ctggcaaaagaagtaccagatctatgtttttctgatgactatttctctgataaaggagca
gcaaaagaagaaaaaccaaagaatgaccaagaaccagtaaacagaataatccaaaagaaa
gaaaataacgatcactttgaacttgactgcacaggactatctattaaatcaccttcctct
tcaataattaaaaaagcatcttttgaacatggcaaaaaacaagagaatgatttggacctt
ttgagcgactttattatgctgcgaaataaatataagacttgcacctcaaagactgaagtc
acaaacagtgatgaaaaacatgataaagaagcatgttctttgacacttcaagaagaaagt
cctattgttcatattaataaaaccctggaggaaataaatcgggaaaggggaacagataat
gtcattgaaattcaagcgtcagatagccagtgccaagcattttgcctcctcaaagcagca
gcttctcctatcttaaaaaaccttgtatccttgtgtaccctccctactgctaattggaaa
tttgccactgttatttttgaccaaacaaggtttctcttaaaggaacaagaaaaagtagta
agtgatgctgttcaccaaggtacaattgatgaaagagaaatgactttcaagcatgccgct
ctcttacatcttctggtaacaattagagatgtccttttaacatgcagcttggacacagca
ttgggatatttgtcgaaggcaaaagatatctacaacagcattttaggcccttatttgggt
gacatttggagacagctggagattgtacagtttattagggggaaaaagcctgaaaccaac
tacaagatacaagaattgcaatgtcagatactcagttggatgcaaagtcaacagcaaatt
aaggtactgattataataagaatggactcagatggtgaaaaacattttctcattaaaatt
cttaacaaaatagaaggtttaacactgactgtccttcattcaaatgaaagaaaagatttt
ctggaatctgaaggtgttttaaagggtacaagttcctgtgtagttgtacataatcaatat
attggagcagatttcccctggagtaagttctcatttgtggtggaatacaattatgtggaa
gactcttgttggactaaacactgcaaagagttgaatattccttacacggcctttaaagtg
attgttccagacacagttttagaaagaagcaccttgttggatagatttggaggttttctt
ttggaaattcagattccatatgtgttttttgcatctgaaggacttcttaatactccagac
atacttcagctgctagaatccaactataacatctcactagtagagagaggctgcagtgag
tcactgaaactctttggaagttcagagcgttatgtagtggtgacaattgatgaacacact
gccataattttgcaggatctagaagaattgaattgtgagaaggcatcagacaatatcatt
atgaggctgatggcattatcattacagtacagatattgttggataattttatataccaaa
gaaacattaaattcagagtatccgcttacagaaaagacacttcatcacctagcactgatt
tatgcagctttggtttcatttgggctaaactctgaagaactggatgtaaagcttataatt
gccccaggagtagaagcaactgctttgataattcgacaaattgctgacaacagtttaatg
acctcaaagagagatcctcatgaatggttggataaatcctggcttaaagtttcaccatct
gaggaagaaatgtacttacttgattttccatgtattaacccattggtggctcagctcatg
ctaaataaaggaccttcactgcattggatattattagcaactctgtgtcaacttcaggaa
ctcctacctgaagtcccagaaaaagtgttaaagcatttttgtagcatcacttccctattc
aagattagttcttcttccataacaaaatcaccgcaaatttcgtcacctcaggaaaatagg
aatcagattagtacctcgtcttctcagagtttagcttctgatttagactctgtcattcaa
gaacataatgaatattatcagtatttaggattaggagagacagtgcaggaagacaaaacc
accactttgaatgacaactcttccattatggaactaagagaaatctcaagttttttacca
cctgtgacttcatacaatcagaccagctactggaaagactccagctgtaaacctaatata
gggcagaatactcgttttctaattaatatagaatcaaggagaccggcttgtaactccttt
ctaaaccacagtgattcagagtcagatgtcttttctttgggtctaacacaaatgaactgt
gaaactataaaatcaccaactgacactcagaagagagtgtcagttgtcccccgttttata
aattctcagaaaaggagaacacatgaagcaaaaggtttcataaataaagatgtatcggac
cctatcttttcactagagggcactcaatctcctcttcattggaactttaagaaaaatgta
tgggaacaagagaatcacccgttcaacttacaatatggtgcacagcagactgcatgtaac
aaattgtactctcagaaaggtaatttattcactgatcagcaaaaatgtctatcagatgag
tctgaaggcctcacatgtgaaagttcaaaagatgagactttctggagagaattaccatct
gtccccagtttggatttatttcgtgcttctgattctaatgcaaatcaaaaagaattcaac
agcctttatttctaccaaagagctggaaaaagtttaggacaaaaaaggcaccatgaatct
tcatttaactcaggagacaaggaatcattaacaggttttatgtactcacaactaccacaa
ttcaaaaaacgacgtctagcatatgaaaaagtccctggtagagttgatgggcagactcgg
ctgaggtttttttga

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