Gorilla gorilla gorilla (western lowland gorilla): 101149935
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Entry
101149935 CDS
T02442
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
ggo
Gorilla gorilla gorilla (western lowland gorilla)
Brite
KEGG Orthology (KO) [BR:
ggo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ggo04121
]
101149935 (PDZRN3)
Enzymes [BR:
ggo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101149935 (PDZRN3)
Ubiquitin system [BR:
ggo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
101149935 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-TRAF
Sina_ZnF
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
101149935
NCBI-ProteinID:
XP_004035952
Ensembl:
ENSGGOG00000008313
UniProt:
G3QZ25
LinkDB
All DBs
Position
2:complement(join(83276017..83277582,83278324..83278440,83280617..83280718,83282486..83282548,83283680..83283778,83293632..83293719,83296845..83297092,83495572..83495679,83501797..83501883,83517302..83518024))
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AA seq
1066 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAYAARGCDRVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAHNGALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQLVDTGTQT
DITFEHIMALTKMSSPSPPVLDPYLLPEEHPSAHEYYDPNDYIGDIHQEMDREELELEEV
DLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
SVLQQKKHDEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDATASSNPL
AGQRKLTCSQDTLGSGDLPFSNESFISADCTDADYLGIPVDECERFRELLELKCQVKSAT
PYGLYYPSGPLDAGKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLKEQYRESWM
LHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLR
RAAEGISCPSSEGAVGTTEAYGPASKNLLSITEDPEVGTPTYSPSLKELDPNQPLESKER
RASDGSRSPTPSQKLGSAYLPSYHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQM
SLVSMCKDLSSPTPSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMTTD
DDAVSEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCLKEQQAADDRKEMNILEL
SHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgcgcgctg
tgccacaaggtcctggaggacccgctgaccacgccgtgcggccacgtcttctgcgccggc
tgcgtgctgccctgggtggtgcaggagggcagctgcccggcgcgctgccgcggtcgcctg
tcggccaaagagctcaaccacgtcctgccgctcaagcgccttatcctcaagctggacatc
aagtgcgcgtacgcggcgcgcggctgcgaccgggtggtcaagctgcagcagctgccggag
cacctcgagcgctgcgacttcgcgcccgcgcgctgtcgccacgcgggttgcggccaggtg
ctgctgcggcgcgacgtggaggcgcacatgcgcgacgcgtgcgacgcgcggccagtgggc
cgctgccaggagggctgcgggctgcccttgacgcacggcgagcagcgcgcgggcggccac
tgctgcgcgcgagcgctgcgggcgcacaacggcgcgctccaggcccgcctgggcgcgctg
cacaaggcgctcaagaaggaggcgctgcgcgctgggaagcgcgagaagtcgctggtggcc
cagctggccgcggcgcagcttgagctgcagatgaccgcgctgcgctaccagaagaaattc
accgaatacagcgcgcgcctcgactcgctcagccgctgcgtggccgcgccgcccggcggc
aagggcgaagaaaccaaaagtctgactcttgtcctgcatcgggactccggctccctggga
ttcaatattattggtggccggccgagtgtggataaccacgatggatcatccagtgaagga
atctttgtatccaagatagttgacagtgggcctgcagccaaggaaggaggcctgcaaatt
catgacaggattattgaggtcaacggcaaagacttatccagagcaactcatgaccaggct
gtggaagctttcaagacagccaaggagcccatagtggtgcaggtgttgagaagaacacca
aggaccaaaatgttcacgcctccatcagagtcgcagctggtggacacgggaacccaaacc
gacatcacctttgaacatatcatggccctcactaagatgtcctctcccagcccaccggtg
ctggatccctatctcttgccagaggagcatccctcagcccatgaatactacgatccaaat
gactacattggagacatccatcaggagatggacagggaggagctggagctggaggaagtg
gacctttacagaatgaacagccaggacaagctgggcctcactgtgtgctaccggacggac
gatgaagacgacattgggatttatatcagtgagattgaccctaacagcattgcagccaag
gatgggcgcatccgagaaggagaccgcattatccagattaatgggatagaggtgcagaac
cgtgaagaggctgtggctcttctaaccagtgaagaaaataaaaacttttcattgctgatt
gcaaggcctgaactccagctggatgagggctggatggacgatgacaggaacgactttctg
gatgacctgcacatggacatgctggaggagcagcaccaccaggccatgcaattcacagct
agcgtgcttcagcagaagaagcacgacgaagacggtgggaccacagatacagctaccatc
ttgtccaaccagcacgagaaggacagcggtgtggggcggaccgacgagagcacccgtaat
gacgagagctcggagcaagagaacaatggcgacgacgccaccgcatcctccaacccgctg
gcggggcagaggaagctcacctgcagccaggacaccttgggcagcggcgacctgcccttc
agcaacgagtctttcatttcggccgactgcacggacgccgactacctggggatcccggtg
gacgagtgcgagcgcttccgcgagctcctggagctcaagtgccaggtgaagagcgccacc
ccttacggcctgtactaccctagcggccccctggacgccggcaagagtgaccctgagagc
gtggacaaggagctggagctgctgaacgaggaactgcgcagcatcgagctggagtgcctg
agcatcgtgcgcgcccacaagatgcagcagctcaaggagcagtaccgtgagtcctggatg
ctgcacaacagtggcttccgcaactacaacaccagcatcgacgtgcgcagacacgagctc
tcagacatcaccgagctcccggagaaatccgacaaggacagctcgagcgcctacaacaca
ggcgagagctgccgcagcaccccgctcaccctggagatctcccccgacaactccttgagg
agagcggcggagggcatcagctgcccgagcagcgaaggggctgtggggaccacggaagcc
tacgggccagcctccaagaatctgctctccatcacggaagatcccgaagtgggcacccct
acctatagcccgtccctgaaggagctggaccccaaccagcccctggaaagcaaagagcgg
agagccagcgacgggagccggagccccacgcccagccagaagctgggcagcgcctacctg
ccctcctatcaccactccccatacaagcacgcgcacatcccggcgcacgcccagcactac
cagagctacatgcagctgatccagcagaagtcggccgtggagtacgcgcaaagccagatg
agcctggtgagcatgtgcaaggacctgagctctcccaccccgtcggagccgcgcatggag
tggaaggtgaagatccgcagcgacgggacgcgctacatcaccaagaggcccgtgcgggac
cgcctgctgcgggagcgcgccctgaagatccgggaagagcgcagcggcatgaccaccgac
gacgacgcggtgagcgagatgaagatggggcgctactggagcaaggaggagaggaagcag
cacctggtgaaggccaaggagcagcggcggcggcgcgagttcatgatgcagagcaggttg
gattgtctcaaggagcagcaagcagccgatgacaggaaggagatgaacattctcgaactg
agccacaaaaagatgatgaagaagaggaataaaaaaatcttcgataactggatgacgatc
caagaactcttaacccacggcacaaaatccccggacggcactagagtatacaattccttc
ctatcggtgactactgtataa
DBGET
integrated database retrieval system
