KEGG   Gorilla gorilla gorilla (western lowland gorilla): 101150804
Entry
101150804         CDS       T02442                                 
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X3
  KO
K01148  poly(A)-specific ribonuclease [EC:3.1.13.4]
Organism
ggo  Gorilla gorilla gorilla (western lowland gorilla)
Pathway
ggo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ggo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101150804 (PARN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ggo03019]
    101150804 (PARN)
Enzymes [BR:ggo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     101150804 (PARN)
Messenger RNA biogenesis [BR:ggo03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     101150804 (PARN)
SSDB
Motif
Pfam: CAF1 RNA_bind RRM_R3HCC1L R3H RRM_Thc1 RRM_1 T6PP_C
Other DBs
NCBI-GeneID: 101150804
NCBI-ProteinID: XP_030858539
Ensembl: ENSGGOG00000025224
LinkDB
Position
18:join(32534425..32534443,32534876..32534953,32536299..32536378,32537215..32537282,32537364..32537445,32547086..32547146,32553919..32554084,32555601..32555666,32556405..32556443,32558198..32558240,32560512..32560592,32564774..32564830,32571336..32571413,32578346..32578389,32579916..32579958,32580285..32580360,32582414..32582524,32583513..32583582,32608798..32608853,32610352..32610438,32612394..32612468,32680349..32680538,32716139..32716332,32726461..32726516)
AA seq 639 aa
MEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVSALTNGFDTPEERYQKLKKH
SMDFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLANQG
FDFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGAGALSYVSPNTSKCPVTIPEDQKKF
IDQVVEKIEDLLQSEENKNLDLEPCTGFQRKLIYQTLSWKFPKGIHVETLETEKKERYIV
ISKVDEEERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQF
YCPLPADLSEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFNPPKV
ESAEGFPSYDTASEQLHEAGYDAYITGLCFISMANYLGSFLSPPKIHVSARSKLIEPFFN
KLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTS
AFVSLSQPEQVKIAVNTSKYAESYRIQTYAEYMGRKQEEKQIKRKWTEDSWKEADSKRLN
PQCIPYTLQNHYYRNNSFTAPSTVGKRNLSPSQEEAGLEDGVSGEISDTELEQTDSCAEP
LSEGRKKAKKLKRMKKELSPAGSISKNSPATLFEVPDTW
NT seq 1920 nt   +upstreamnt  +downstreamnt
atggagataatcaggagcaattttaagagtaatcttcacaaagtgtaccaggccatagag
gaggccgacttcttcgccatcgatggggagttttcaggaatcagtgatggaccttcagtc
tctgcattaacaaatggttttgacactccagaagagaggtatcagaagcttaaaaagcat
tccatggactttttgctatttcagtttggcctttgcacttttaagtatgactacacagat
tcaaagtatataacgaagtcatttaacttctatgttttcccgaaacccttcaatagatcc
tcaccagatgtcaaatttgtttgtcagagctccagcattgactttctagcaaaccaggga
tttgattttaataaagtttttcgaaatggaattccatatttaaatcaggaagaagaaaga
cagttaagagagcagtatgatgaaaaacgttcacaggcgaatggtgcaggagctctgtcc
tatgtatctcctaacacttcaaaatgtcctgtcacgattcctgaggatcaaaagaagttt
attgaccaagtggtagagaaaatagaggatttattacaaagtgaagaaaacaagaacttg
gatttagagccatgtaccgggttccaaagaaaactaatttatcagactttgagctggaag
tttccgaaaggcattcatgttgagactttagaaactgaaaagaaggagcgatatatagtt
atcagcaaagtagatgaagaagaacgcaaaagaagagagcagcagaaacatgccaaagaa
caggaggagctgaatgatgctgtgggattttctagagtcattcacgccattgctaattcg
ggaaaacttgttattggacacaatatgctcttggacgtcatgcacacagttcatcagttc
tactgccctctgcctgcggacttaagtgagtttaaagagatgacaacatgtgttttcccc
agactcttggatactaaattgatggccagcacacaaccttttaaggatatcattaacaac
acatcccttgcggaattggaaaagcggttaaaagagacacctttcaacccccctaaagtt
gaaagtgccgaaggttttccaagttatgacacagcctctgaacaactccacgaggcaggc
tacgatgcctacatcacagggctgtgcttcatctccatggccaattacctaggttctttt
ctcagccctccaaaaattcatgtgtctgccagatcaaaactcattgaacctttttttaac
aagctatttcttatgagggtcatggatatcccctatctaaacttggaaggaccagacttg
cagcctaaacgtgatcatgttctccatgtgacattccccaaagaatggaaaaccagcgac
ctttaccagcttttcagtgcctttggtaacattcagatatcctggattgatgacacatca
gcatttgtttcccttagccagcccgagcaagtaaagattgctgtcaataccagcaaatat
gcagaaagctatcggatccaaacctatgctgaatatatggggagaaaacaggaagagaag
cagatcaaaagaaagtggactgaagatagctggaaggaggctgacagcaaacggttaaac
ccccagtgcataccctacaccctgcagaatcactattaccgcaacaatagttttacagct
cccagcacagtaggaaagagaaatttgagtcctagtcaagaggaagctggcctggaggac
ggagtgtcaggggagatttccgacactgagcttgagcagactgattcctgtgcagagccc
ctctcagagggaaggaaaaaggccaagaaattaaaaagaatgaagaaggagctttctcca
gcaggaagcatctcgaagaacagccctgccacactctttgaagttcctgacacatggtaa

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