KEGG T02442: 101151258

Gorilla gorilla gorilla (western lowland gorilla): 101151258

Entry

101151258         CDS       T02442

Symbol

ERCC3

Name

(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB isoform X1

K10843

DNA excision repair protein ERCC-3 [EC:5.6.2.4]

Organism

ggo Gorilla gorilla gorilla (western lowland gorilla)

Pathway

ggo03022

Basal transcription factors

ggo03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:ggo00001]
09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101151258 (ERCC3)
  09124 Replication and repair
   03420 Nucleotide excision repair
    101151258 (ERCC3)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ggo03021]
    101151258 (ERCC3)
   03400 DNA repair and recombination proteins [BR:ggo03400]
    101151258 (ERCC3)
Enzymes [BR:ggo01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     101151258 (ERCC3)
Transcription machinery [BR:ggo03021]
Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     101151258 (ERCC3)
DNA repair and recombination proteins [BR:ggo03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     101151258 (ERCC3)

SSDB

Motif

Pfam:

ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom AAA_22 AAA_34

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

11:complement(join(28809426..28809557,28811120..28811272,28813053..28813171,28823537..28823654,28825047..28825143,28831360..28831562,28832635..28832819,28838918..28839232,28840859..28841063,28841538..28841702,28841890..28842025,28842434..28842483,28844770..28845006,28845667..28845872,28846206..28846233))

AA seq 782 aa
MGKRDRADRDKKKSRKRHYEDEEDDEEDAPGNDPQEAVPSAAGKQVDESGTKVDEYGAKD
YRLQMPLKDDHTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTA
YSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIMQFIKLCTVSYGKVKLVLKHNRYFVESS
HPDVIQHLLQDPVIRECRLRNSEGEATELITETFTSKSAISKTAESSGGPSTSRVTDPQG
KSDIPMDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRND
SVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKR
CLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRS
WEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDL
NFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNK
FRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNP
KINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFY
SLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAAT
DLDAEEEVVAGEFGSRSSQASRRFGTMSSMSGADDTVYMEYHSSRSKAPSKHVHPLFKRF
RK

NT seq 2349 nt +upstreamnt +downstreamnt
atgggcaaaagagaccgagcggaccgcgacaagaagaaatccaggaagcggcactatgag
gatgaagaggatgatgaagaggacgcccctgggaacgaccctcaggaagcggttccctcg
gcggcggggaagcaggtggatgagtcaggcaccaaagtggatgaatatggagccaaggac
tacaggctgcaaatgccgctgaaggacgaccacacctccaggcctctctgggtggctccc
gatggccatatcttcttggaagccttctctccagtttacaaatatgcccaagacttcttg
gtggctattgcagagccagtgtgccgaccaacccatgtgcatgagtacaaactaactgcc
tactccttgtatgcagctgtcagcgttgggctgcaaaccagtgacatcaccgagtacctc
aggaagctcagcaagactggagtccctgatggaattatgcagtttattaagttgtgtact
gtcagctatggaaaagtcaagctggtcttgaagcacaacagatacttcgttgaaagttcc
caccctgatgtaatccagcatcttctccaggacccggtgatccgagaatgccgcttaaga
aactctgaaggggaggccactgagctcatcacagagactttcacaagcaaatctgccatt
tctaagactgctgaaagcagtggtgggccctccacttcccgagtgacagatccacagggc
aaatctgacatccccatggacctgtttgacttctatgagcaaatggacaaggatgaggaa
gaagaagaagagacacagacagtgtcttttgaagtcaagcaggaaatgatcgaggaactc
cagaaacgttgcatccacctggagtaccctctgttggcagaatatgacttccggaatgat
tctgtcaaccctgatatcaacattgacctaaagcccacagctgtcctcaggccctatcag
gagaagagcttgcgaaagatgtttggaaacgggcgtgcacgttcgggggtcattgttctt
ccctgcggtgctggaaagtccctggttggtgtgactgctgcatgcactgtcagaaaacgc
tgtctggtgctgggcaactcagccgtttctgtggagcagtggaaagcccagttcaagatg
tggtccaccattgacgacagccagatctgccggttcacctccgatgccaaggacaagccc
atcggctgctccgttgccattagcacctactccatgctgggccacaccaccaaaaggtcc
tgggaggccgagcgagtcatggagtggctcaagacccaggagtggggcctcatgatcctg
gatgaagtgcacaccataccagccaagatgttccgaagggtgctcaccatcgtgcaggcc
cactgtaagctgggtttgactgcgaccctcgtccgcgaagatgacaaaattgtggattta
aattttctgattgggcctaagctctacgaagccaactggatggagctgcagaataatggc
tacatcgccaaagtccagtgtgctgaggtctggtgccctatgtctcctgaattttaccgg
gaatatgtggcaatcaaaaccaagaaacgaatcttgctgtacaccatgaaccccaacaaa
tttagagcttgccagtttctgatcaagtttcatgaaaggaggaatgacaagattattgtc
tttgctgacaatgtgtttgccctgaaggaatatgccattcgactgaacaaaccctatatc
tacggacctacgtctcagggggaaaggatgcaaattctccagaatttcaagcacaacccc
aaaattaacaccatcttcatatccaaggtaggtgacacttcgtttgatctgccggaagca
aatgtcctcattcagatctcatcccatggtggctccaggcgtcaggaagcccaaaggcta
gggcgggtgcttcgagctaaaaaagggatggttgcagaagagtacaatgcctttttctac
tcactggtatcccaggacacacaggaaatggcttactcaaccaagcggcagagattcttg
gtagatcaaggttatagcttcaaggtgatcacgaaactcgctggcatggaggaggaagac
ttggcgttttcgacaaaagaagagcaacagcagctcttacagaaagtcctggcagccact
gacctggatgctgaggaggaggtggtggctggggaatttggctccagatccagccaggca
tctcggcgctttggcaccatgagttctatgtctggggccgacgacactgtgtacatggag
taccactcatcgcggagcaaggcgcccagcaaacatgtacacccgctcttcaagcgcttt
aggaaatga

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