KEGG   Gorilla gorilla gorilla (western lowland gorilla): 101151938
Entry
101151938         CDS       T02442                                 
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
  KO
K06823  collagen type XVIII alpha
Organism
ggo  Gorilla gorilla gorilla (western lowland gorilla)
Pathway
ggo04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:ggo00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    101151938 (COL18A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ggo04147]
    101151938 (COL18A1)
   00535 Proteoglycans [BR:ggo00535]
    101151938 (COL18A1)
   00536 Glycosaminoglycan binding proteins [BR:ggo00536]
    101151938 (COL18A1)
Exosome [BR:ggo04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   101151938 (COL18A1)
Proteoglycans [BR:ggo00535]
 Extracellular matrix (ECM) proteoglycans
  Basement membrane proteoglycans
   101151938 (COL18A1)
Glycosaminoglycan binding proteins [BR:ggo00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   101151938 (COL18A1)
SSDB
Motif
Pfam: Endostatin Collagen DUF959 Collagen_trimer Laminin_G_3
Other DBs
NCBI-GeneID: 101151938
NCBI-ProteinID: XP_055229710
Ensembl: ENSGGOG00000011704
LinkDB
Position
22:join(47317880..47318534,47330623..47331167,47336397..47336483,47338303..47338362,47339178..47339307,47340082..47340158,47340420..47340635,47340996..47341022,47342565..47342627,47342733..47342819,47343142..47343195,47343375..47343533,47344581..47344643,47345405..47345431,47349225..47349356,47349809..47349871,47350777..47350803,47351806..47351841,47352987..47353058,47353663..47353698,47354053..47354142,47355374..47355403,47355526..47355552,47355953..47356015,47356291..47356365,47357365..47357391,47357682..47357735,47358178..47358252,47359302..47359370,47359852..47359894,47360401..47360463,47366283..47366326,47366688..47366819,47367459..47367612,47367692..47367765,47368169..47368300,47369943..47369975,47372058..47372303,47372764..47372961,47373885..47374000,47375008..47375218)
AA seq 1523 aa
MAPYPCGCHILLLLFCCLAAARANLLNLNWLWFNNEDTSHAATTIPEPQGPLPVQPTADT
TPADTHVTPQNGSTEPATAPGSPEPPSELLEDSQDTPTSAESLDAPEENIAGVGAEILNV
AKGIRSFVQLWNDTVPTESLARAETLVLETPVGPLALAGPSSTPQENGTTLWPSRGIPSS
LGAHTTKAGTLPAPTPSPPSLGRPWAPLTGPSVPPPSSERVSEEVGLLQLLGDPPPQQVT
QTDDPDVGLAYVFGPDANSGQVARYHFPSLFFRDFSLLFHIRPATESPGVLFAITDSAQA
VVLLGVKLSGVQDGHQDISLLYTEPGAGQTHTAASFRLPAFVGQWTHLALSVAGGFVALY
VDCEEFQRMPLARSSRGLELEPGAGLFVAQAGGADPDKFQGVIAELKVRRDPQVSPMHCL
DEEGDDSDGASGDSGSGLGDARELLREETGAALKPRLPMPPPVTTPPLAGGSSTEDSRSE
EIEEQTTVASLGAQTLPGSDSVSTWDGSVRTPGGRVKEGGLKGQKGEPGVPGPPGRAGPP
GSPCLPGPPGLPCPVSPLGPAGPALQPVPGPQGPPGPPGRDGTPGRDGEPGDPGEDGKPG
DTGPQGFPGTPGDLGPKGDKGDPGVGERGPPGPQGPPGPPGPSFRHDKLTFIDMEGSGFG
GDLEALRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDVPGPAGLPGVPGREGPPGFPGLP
GPPGPPGREGPPGRTGQKGSLGEAGAPGPKGSKGDPGPAGARGESGLAGAPGPAGPPGPP
GPPGPPGPGLPAGFDDMEGSGGPFWSTARSADGPQGTPGLPGLKGDPGVPGLPGAKGEVG
ADGVPGFPGLPGREGIAGPQGPKGDRGSQGEKGDPGKDGVGQPGLPGPPGPPGPVVYVSE
QDGSVLSVPGPEGRPGFAGFPGPAGPKGNLGSKGERGSPGPKGEKGEPGSIFSPNGGALG
PAQKGAKGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPGMNGLKGEKGEPGDASLGFGMRG
MPGPPGPPGPPGPPGTPVYDSNVFAESSRPGPPGLPGNQGPPGPKGAKGEVGPPGPPGQF
PFDFLQLEAEMKGEKGDRGDAGQKGERGEPGGGGFFGSSLPGPPGPPGPRGYPGIPGPKG
ESIRGQPGPHGPQGPPGIGYEGRQGPPGPPGPPGPPGPPSFPGPHRQTISVPGPPGPPGP
PGPPGTMGASSGQVRLWATRQAMLGQVHEVPEGWLLFVAEQEELYVRVRNGFRKVQLEAR
TPLPRGTDNEVAALQPPMVQLHDSNPYPRREHPHPTARPWRADDILASPPRLPEPQPYPG
APHHSSYVHLRPAQPTSPPAHTHRDFQPVLHLVALNSPLSGSMRGIRGADFQCFQQARAV
GLAGTFRAFLSSRLQDLYSIVRRADRAAVPIVNLKDELLFPSWEALFSGSEGPLKPGARI
FSFDGKDVLRHPTWPQKSVWHGSDPNGRRLTESYCETWRTEAPSATGQASSLLGGRLLGQ
SAASCHHAYIVLCIENSFMTASK
NT seq 4572 nt   +upstreamnt  +downstreamnt
atggctccctacccctgtggctgccacatcctgctgctgctcttctgctgcctggcggct
gcccgggccaacctgctgaacctgaactggctttggttcaataatgaggacaccagccac
gcagctaccacgatccctgagccccaggggcccctgcctgtgcagcccacagcagatacc
accccagcagatacacacgtgaccccccagaatggttccacagagccagcgacagcccct
ggcagccctgagccaccctcagagcttctggaagacagccaggacacccccacttctgcc
gagagcctggacgcgccagaggagaacattgccggtgtcggagccgagatcctgaacgtg
gccaaaggcatccggagcttcgtccagctgtggaatgacactgtccccactgagagcttg
gccagggcggaaacgctggtcctcgagactcccgtgggcccccttgccctcgctgggcct
tccagcaccccccaggagaatgggaccactctctggcccagccgtggcattcctagctct
ctgggcgcccacacaaccaaggctggcaccttgcctgcacccaccccatcgcctccctcc
ctgggcaggccctgggcaccactcacggggccctcagtgccaccaccgtcttcagagcgc
gttagcgaggaggtggggctgctgcagctccttggggaccccccgccccagcaggtcacc
cagacggatgaccccgacgtcgggctggcctacgtctttgggccagatgccaacagtggc
caagtggcccggtaccacttccccagcctcttcttccgcgacttctcactgctgttccac
atccggccagccacagagagcccaggggtgctgttcgccatcacggactcggcgcaggcc
gtggtcttgctgggcgtgaagctctctggggtgcaggacgggcaccaggacatctccctg
ctctacacggaaccaggtgcaggccagacccacacagccgccagcttccggctccccgcc
ttcgtcggccagtggacacacttagccctcagtgtggcgggtggctttgtggccctctac
gtggactgtgaggagttccagagaatgccgcttgctcggtcctcacggggcctggagctg
gagcctggcgccgggctcttcgtggctcaggccgggggagcggaccctgacaagttccag
ggggtgatcgctgagctgaaggtgcgcagggacccccaggtgagccccatgcactgcctg
gacgaggaaggtgatgactcagatggggcatccggagactctggcagcgggctcggggac
gcccgggagcttctcagggaggagacgggcgcggccctaaaacccaggctccccatgcca
cccccggtcaccactccacccttggctggaggcagcagcacggaagattccagaagtgaa
gaaatcgaggagcagacaacggtggcttcgttaggagctcagacacttcctggctcagat
tctgtctccacgtgggacgggagtgtccggacccctgggggccgcgtgaaagagggcggc
ctgaaggggcagaaaggggagccaggtgttccgggcccacctggccgggcaggcccccca
ggatccccatgcctacctggtcccccgggtctcccgtgcccagtgagtcccctgggtcct
gcaggcccagcgttgcaacctgtccccggaccacaaggacccccagggcctccggggagg
gacggcacccctggaagggatggcgagccgggtgaccctggtgaagacggaaagccgggc
gacaccgggccacaaggcttccccgggactccaggggacttaggtcccaagggcgacaag
ggagaccctggggttggagagagaggtcccccaggaccccaagggcctccagggccccca
ggaccctccttcagacacgacaagctgaccttcattgacatggagggatctggcttcggg
ggcgatctggaggccctgcggggtcctcgaggcttccctggaccccccggaccccccggt
gtcccaggcctgcccggcgagccaggccgctttggggtgaacagctccgacgtcccagga
cccgccggccttcctggtgtgcctgggcgcgagggtccccccgggtttcccggcctcccg
ggacccccaggccctccgggaagagaggggcccccaggaaggactgggcagaaaggcagc
ctgggtgaagcaggcgccccaggacctaaggggagcaagggagaccccggtcctgctggc
gctcgtggggagagcggcctggcaggagcccctggacctgctggaccaccaggcccccct
gggccccctgggccaccaggaccaggactccccgctggatttgatgacatggaaggctcc
ggggggcccttctggtcaacagcccgaagcgctgatgggccacagggaactcccggcctg
ccgggactcaagggggatcctggcgtgcctgggctgccgggggcgaagggagaagttgga
gcagatggagtccccgggttccccggcctccctggcagagagggcattgctgggccccag
gggccaaagggagacagaggcagccagggagaaaagggagatccagggaaggacggagtc
gggcagccgggcctccctggcccccccggacccccggggcctgtggtctacgtgtcggag
caggacggatccgtcctgagcgtgccgggacctgagggccggccgggtttcgcaggcttt
cccggacctgcaggacccaagggcaacctgggctctaagggcgaacgaggctccccggga
cccaagggtgagaagggtgaaccgggcagcatcttcagccccaacggcggtgccctgggc
cctgcccagaaaggagccaagggagagccaggcttccgaggacccccgggtccatacgga
cggccggggtacaagggagagattggctttcctggacggccgggtcgccccgggatgaac
ggattgaaaggagagaaaggggagccgggagatgccagccttggatttggcatgagggga
atgcctggccccccagggcctccagggcccccaggccctccagggactcctgtttacgac
agcaatgtgtttgctgagtccagccgccccgggcctccaggattgccagggaatcagggc
cctccaggacccaagggcgccaaaggagaagtgggcccccccggaccaccagggcagttt
ccgtttgactttcttcagttggaggctgaaatgaagggggagaagggagaccgaggtgat
gcaggacagaaaggcgaaaggggggagcccgggggcggcggtttcttcggctccagcctg
ccaggcccccccggccccccaggcccacgtggctaccccgggattccaggtcccaaggga
gagagcatccggggccagcccggcccacatggacctcagggaccccccggcatcggctac
gaggggcgccagggccctcccggccccccaggcccccccggccccccagggcccccttca
tttcctggccctcacaggcagactatcagcgttcccggccctccgggcccccctgggccc
cctgggccccctggaaccatgggcgcctcctcagggcaggtgaggctctgggctacgcgc
caggccatgctgggccaggtgcacgaggttcccgagggctggctcctcttcgtggccgag
caggaggagctctacgtccgcgtgcggaacgggttccggaaggtccagctggaggcccgg
acaccactcccacgagggacggacaatgaagtggccgccttgcagccccccatggtgcag
ctgcacgacagcaacccctacccgcggcgggagcacccccaccccaccgcgcggccctgg
cgggcagatgacatcctggccagcccccctcgcctgcccgagccccagccctaccccgga
gccccacaccacagctcctacgtgcacctgcggccggcgcaacccacaagcccacccgcc
cacacccaccgcgacttccagcccgtgctccacctggttgcgctcaacagccccctgtca
ggcagcatgcggggcatccgcggggccgacttccagtgcttccagcaggcgcgggccgtg
gggctggcgggcaccttccgcgccttcctgtcctcgcgcctgcaggacctgtacagcatc
gtgcgccgtgccgaccgcgcggccgtgcccatcgtcaacctcaaggacgagctgctgttt
cccagctgggaggctctgttctcaggctctgagggtccgctgaagcccggggcacgcatc
ttctcctttgatggcaaggacgtcctgaggcaccccacctggccccagaagagcgtgtgg
catggctcggaccccaacgggcgcaggctgaccgagagctactgtgagacgtggcggacg
gaggctccctcggccacgggccaggcctcctcgctgctggggggcaggctcctggggcag
agtgccgcgagctgccatcacgcctacatcgtgctctgcattgagaacagcttcatgact
gcctccaagtag

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