KEGG   Gorilla gorilla gorilla (western lowland gorilla): 101152893
Entry
101152893         CDS       T02442                                 
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X3
  KO
K13191  RNA-binding protein 16
Organism
ggo  Gorilla gorilla gorilla (western lowland gorilla)
Brite
KEGG Orthology (KO) [BR:ggo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ggo03021]
    101152893 (SCAF8)
   03041 Spliceosome [BR:ggo03041]
    101152893 (SCAF8)
Transcription machinery [BR:ggo03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     101152893 (SCAF8)
Spliceosome [BR:ggo03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    101152893 (SCAF8)
SSDB
Motif
Pfam: CID RRM_1 Transformer DUF3525 RRM_occluded
Other DBs
NCBI-GeneID: 101152893
NCBI-ProteinID: XP_004044916
Ensembl: ENSGGOG00000008645
UniProt: A0A2I2YF03
LinkDB
Position
5:join(178901797..178901826,178941828..178941911,178945843..178945887,178955605..178955766,178960573..178960726,178962732..178962862,178969694..178969870,178971270..178971349,178973097..178973214,178976101..178976232,178976720..178976832,178978049..178978242,178983738..178983838,178986505..178986618,178988201..178988357,178990266..178990399,178992221..178992365,178995180..178995248,178999244..178999462,179000240..179001696)
AA seq 1271 aa
MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN
NVFKSEIIQPLLDMAAGIPPPVVTPVLASTTTAMSNTPGTPVTPVTPANVVQGLPDPWVS
QITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSILQALDAGLVVQLQALTAQL
TAAAAAANTLTPLEQGVSFNKKLMDRFDFGEDSEHSEEPKKEIPASQLSHVSESVNNSIF
HQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFGSEHSASPSQGSSQQHFLEPEV
NLDDSIDIQQQDMDIDEGQDGVEEEVFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRS
GSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLW
VGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIG
SKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQETVNTEWE
TVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFP
VSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPSL
SMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISS
GENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGI
IAAQPPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTSGLLGTQ
PPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPSVLDS
ALHPPPRGPFPPGDIFSQPERPFLAPGRQSVDNVTNPEKRIPLGNDNIQQEGDRDYRFPP
IETRESISRPPPVDVRDVVGRPIDPREGPGRPPLDGRDHFGRPPVDIRENLVRPGIDHLG
RRDHFGFNPEKPWGHRGDFDEREHRVLPVYGGPKGLHEERGRFRSGNYRFDPRSGPWNRG
FGQEVHRDFDDRRRPWERQRDRDDRDFDFCREMNGNRLGRDRIQNTWVPPPHARVFDYFE
GATSQRKGDNVPQVNGENTERHAQPPPIPVQNDPELYEKLTSSNEINKEKSDTVADIESE
PVVESTETEGT
NT seq 3816 nt   +upstreamnt  +downstreamnt
atggaggccgtgaagaccttcaatagcgagttgtattccctgaatgactataaaccaccc
atttcgaaagcgaaaatgacccaaattactaaggcagccatcaaagctattaagttctat
aaacatgtggtacagagtgttgagaagtttattcagaaatgtaaaccagaatacaaagta
cctggactttatgttattgactccattgtgcgacaatcccgacatcagtttggtcaagaa
aaggatgtgtttgcacccagatttagtaataacatcattagcactttccagaatttatat
cgttgccctggggatgacaagagtaaaatagtgagagtactaaacttatggcagaagaat
aatgtatttaagagtgagattattcagcctcttttggatatggcagccgggattccgcct
ccagttgtcacacctgttttggccagcactaccactgctatgagcaatactccaggaact
cctgtgacacctgttactccggccaatgtggtccaaggcttacctgatccgtgggtatct
cagataacaaatacagatacacttgcggctgtagctcagatcttgcaaagtcctcaaggc
cagcagcttcaacaattaatacaaaccttacagatacaacaacagaagccacagccttcc
attctgcaggccctagatgctggtcttgttgttcagttgcaagctcttacggcacaactt
acagctgcagctgcagctgccaacactcttactcccttagaacagggagtctcctttaac
aagaagttgatggataggtttgattttggggaagactctgagcatagtgaagaacccaaa
aaggaaattccagcttcacaactttctcacgtttcagaatctgtgaacaattccattttt
catcagatagcagaacaactacaacagcaaaacctagaacatctcagacagcagctcttg
gagcagcaacagcctcaaaaggccactcctcaggatagtcaggaaggaacatttgggtca
gagcattcagcgtcaccatcacaagggagtagtcagcagcattttcttgaacctgaagtc
aatttggatgattccatagatattcagcaacaggatatggatatagatgaagggcaagat
ggagtggaagaggaggtctttgaacaagaagctaagaaagtggcggttcgctcaagatca
agaacacattcacgatctcgttcaagatcaccaagaaaacgaaggtctaggtcacggtct
ggctctagaaagcgtaaacacagaaagcgatcacgctcccgctcaagagaaagaaagagg
aaatcatcacggtcgtattcaagtgaaaggagagccagagaaagggagaaagaacgacag
aaaaagggattacctccaattagatctaaaacactaagtgtatgtagtactactctctgg
gttgggcaagtggacaagaaggcaacacagcaagacttaaccaacctgtttgaagagttt
ggacagattgaatccattaatatgattcctccccggggctgtgcttatgtctgcatggtt
catcgacaagatgcatttcgagctcttcagaaactcagttctggatcatataaaattggg
tccaaggtcattaagatcgcttgggctttaaacaaaggtgtaaaaacagaatacaaacaa
ttctgggatgtggatcttggagttacatatataccatgggaaaaagttaaagtggatgac
ttggaaggttttgcagaaggaggcatgattgatcaggagactgtaaatactgagtgggaa
actgtgaaaagctcagaacctgttaaagagacggtccagacaactcagagcccaactcca
gttgaaaaggagacagtggtcacaacccaggcagaggttttccctcctcctgttgctatg
ttgcagattccagtggcgccagccgtgcctacagttagtttagtcccaccagcatttcct
gtgtcgatgccggttcctcctcctggattcagtccaatccctccacctccttttttaaga
gcaagttttaacccttcacaaccaccacctggtttcatgccgcctccagttcccccacct
gttgtgccaccccctacaattccaccagtagtaccaacatctttagtgcagccgtcatta
tccatgacaccggaaactgtgaaagatgttggatttggtagccttgttataccaggcggt
tctgttgccagcaatcttgctacttccgctctgccagctggaaatgtttttaatgctcca
actaaacaggcagagcctgaagaaaaagtacctcatcttatagaccaccagatttcttct
ggtgaaaacaccagatcagtgattccaaatgatatttcaagtaatgctgcaattttagga
ggacagccgccaaatgtgacaagcaattctggaattctgggagtccaaagaccaaatgta
tcaagtaattctgaaattcttggggtccggccatctaatgtttctagtagttctgggatt
attgcagcccaaccaccaaatattctaaataactctggaatattgggaatacagccaccc
agtgtgtcaaatagttctggacttttgggagtgctacccccaaatatacctaacaattct
ggacttgtaggagtacagccaccaaatgttccaaatacttctggacttctgggaacacag
ccaccagctggacctcaaaacttaccccctttaagtatccctaatcaaaggatgcccaca
atgccaatgttagacattcgtccgggactaataccacaggcacctgggccaagattccct
ttaatacagcctggaattccaccccaacggggaatcccacccccatcggtacttgattca
gctcttcatccaccaccccgtggaccttttcctccaggagatatttttagtcaaccagaa
agaccttttttagctcctggaagacaaagcgtagacaatgttactaacccagaaaaaagg
ataccacttgggaatgataacattcaacaggaaggagatagagattaccggtttcctcct
atagaaaccagggaaagcattagtagacctccccctgtggatgttagagatgtggttggg
cggcctatagatccaagagaaggtcctggacggcctccactagatggtagggatcatttt
ggaagacctcctgtagatataagagagaatcttgtgaggccaggtatagatcatcttggt
cgaagagaccactttggctttaatccagagaagccctgggggcatagaggagattttgat
gagagagagcatcgggttctaccggtctatggtggtccaaaaggcttacatgaagaaaga
ggtagatttcggtctggaaactatcgatttgatcctagaagtggtccttggaaccgagga
tttggacaagaagttcacagagattttgatgaccgcagaagaccctgggagaggcaaagg
gatagggatgacagagattttgatttctgcagagaaatgaatggaaatcgtcttggacga
gacagaattcaaaacacttgggtaccccctcctcatgctcgggtttttgattattttgaa
ggggccacttctcaacgaaaaggtgataatgtgcctcaggttaatggtgaaaatacagag
agacatgctcagccaccacctataccagtacagaatgatcctgaactttatgaaaaactg
acatcttcaaatgaaataaacaaggagaagagtgacacagttgctgatatagaaagtgaa
ccagtggtagaaagcacagaaactgaggggacataa

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