Gemmatimonas groenlandica: HKW67_00205
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Entry
HKW67_00205 CDS
T07783
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K12146
hydrogenase-4 transcriptional activator
Organism
ggr
Gemmatimonas groenlandica
Brite
KEGG Orthology (KO) [BR:
ggr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggr03000
]
HKW67_00205
Transcription factors [BR:
ggr03000
]
Prokaryotic type
Helix-turn-helix
Other families
HKW67_00205
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
AAA_5
HTH_8
AAA
Mg_chelatase
MCM
AAA_16
GAF_3
AAA_22
AAA_2
AAA_7
AAA_3
nSTAND3
DUF815
Motif
Other DBs
NCBI-ProteinID:
QJR34045
UniProt:
A0A6M4IJ20
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All DBs
Position
complement(38987..40618)
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AA seq
543 aa
AA seq
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MTAGTPTPIEPASRRHLDALRDITARITATRDLDDVLASITRGLVESCDAVLARIWLLST
DIECPVCSAHGPVPARGADEGPVTAALHLRASHGSHTNLAGHYHRIRVGALKIGQIAASR
TPVFCNNVFDDDRFVDKQWIEAQAIRAFAGYPLIFRDELLGVIGIFSTGAISEHDFQDLQ
IFADQAATAIRNAQLFAEIAHLNGRLALENAYLQQEIREEGGFEDIVGDSPALRAVLHEI
EQVARTDATVLLTGETGTGKELIARAIHRMSRRSAHTLVKVNCGAFPAGLVESELFGHEK
GAFTGALQQRIGRFELADKGTLFLDEVGELPADAQVKLLRVLQEQEFERVGGARSIRVDV
RVVAATNRDLADEVKTGRFRADLYYRLHVFPMRVPALRERRGDVPLLVQHLLMHLQRKLA
KPLRAITAESMTRLERYTWPGNVRELQNVLERAAVLARGPIVDVPDPNTGAMVQAPEHTV
FASLEDAERTHIREALQRTDGVIHGPGGAAALLKVNPTTLRSRMERLGILTPRRREFPSE
GRP
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgactgctggcactccgactccaatcgaacccgcatcgcggcggcaccttgacgcgttg
cgcgacatcaccgcgcggataacggccacgcgtgacctcgacgacgtactggcgagcatt
acacgcgggttggtggagagttgcgacgctgtgctcgcacgcatctggctgttgagcacg
gacatagaatgcccggtgtgcagcgcgcacgggcccgttccggcgaggggggcggacgaa
ggccccgtaacggcggcgctccacctgcgtgcgagtcacgggtcgcacacgaatctcgct
gggcattatcatcggattcgcgtcggcgcattgaagatcggtcagatcgcagcatcgcgc
acaccggtgttctgcaacaatgtcttcgacgacgatcgattcgtggataagcaatggatt
gaggcgcaggccatccgcgctttcgcgggctacccactgatctttcgtgacgaactactc
ggcgttatcggaatcttctcgaccggcgccatctcagagcacgatttccaggacctacag
atctttgcggatcaggcagcgacggcaatcaggaatgcgcagcttttcgccgagatcgca
cacctgaatggccgactggctctggagaacgcctatctgcagcaggagatacgcgaggag
ggaggctttgaggacattgtcggggacagtccggcacttcgtgcggtgttgcacgagatc
gaacaagttgccaggaccgacgcgacggttctgctcaccggcgagacaggtaccggaaaa
gagctgattgcccgcgccattcatcgaatgagtcggcgctcggcccacacccttgtaaaa
gtgaactgcggcgcctttcccgctggacttgtcgagagcgaattgttcgggcacgaaaag
ggcgcgttcactggtgcgctacagcaacgcattggccgattcgagctggcggacaaaggt
acgctctttctcgacgaggttggcgaactccccgccgacgcgcaggtgaagctcttgcgc
gtgttgcaagaacaggagttcgagcgcgtgggaggtgcgcgatccatccgcgtggacgtg
cgtgtcgtagccgcgacaaaccgcgatctcgcggatgaagtaaagaccgggcgcttccgc
gcagatctgtactatcgcctgcacgtatttcccatgcgcgtacctgcgcttcgcgaacga
cggggcgacgtgccgcttctcgtgcagcacctgctcatgcacttgcagcgcaaactcgca
aagccgctccgcgcgatcaccgcagagagcatgaccagactcgagcggtatacctggcct
ggaaacgtgcgcgagttgcaaaacgtgcttgaacgcgccgcggtactggcgcgcggcccg
attgtggacgtgccggacccgaacacgggcgcgatggtccaagcccccgagcacacagta
tttgcgtcactcgaagacgcagaacgtacgcacattcgcgaggcgcttcagagaaccgac
ggtgtcatccacggtcccggcggtgctgccgcgctattgaaggtcaaccccacgacgctc
cgctcccggatggaacgcttggggatactgacgccccgccgccgtgagttcccctcggag
ggtaggccgtga
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