Gemmatimonas groenlandica: HKW67_00705
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Entry
HKW67_00705 CDS
T07783
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ggr
Gemmatimonas groenlandica
Brite
KEGG Orthology (KO) [BR:
ggr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ggr03016
]
HKW67_00705 (rnz)
Enzymes [BR:
ggr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
HKW67_00705 (rnz)
Transfer RNA biogenesis [BR:
ggr03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
HKW67_00705 (rnz)
Prokaryotic type
HKW67_00705 (rnz)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
DUF6282
Motif
Other DBs
NCBI-ProteinID:
QJR34137
UniProt:
A0A6M4IKT2
LinkDB
All DBs
Position
complement(171669..172637)
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AA seq
322 aa
AA seq
DB search
MPLLVRFLGTAASRPTVERGVSSLAIIREGETLMFDCGEGTQRQMMRYGISFAFDDLFFT
HVHSDHILGLTGLIRTMALQGRTEPLRLWGPRGAGKTLRQCISLGGERTTFPIEITELEP
GEPVKRPDYHLDTFAVSHGPSQSLGYALVEEERLGRFNPDLAREMGIPEGPLWGRIHKGQ
SITLDDGRVIEPSVLVGERRRGRRIVITGDTRPCENTIAAAQDADLLIHEATFADDEAAR
ALETGHSTAREAAEVARKAGARRLVLTHISARYSRDAHELEREARSVFPRSSIARDGTEI
ELSLTEELAAVTEAEGANGIVN
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgcttgtccgcttcctcggaaccgccgcctcccgccccaccgtggaacggggg
gtcagctccctcgccatcattcgcgaaggcgagaccttgatgttcgattgcggggagggg
acgcagcgccagatgatgcgctacgggatctctttcgcgttcgatgatctgttcttcacc
catgtccactcggatcacattctgggactaaccggactgatccgcacgatggcactgcag
gggcgaactgaaccactgagattgtggggaccgcgtggcgctggtaaaacgttgcgccaa
tgcatcagcttaggtggcgagcgcaccacgtttcccatcgaaatcacggagctggagcca
ggcgagccggtcaaacgtcccgactaccacctcgatacattcgcggtgtcccacggcccg
tcccagtcgctcggctacgcgctcgtcgaggaagaacgactcggtcgcttcaaccctgac
ctcgcgcgcgagatgggaattcccgaggggccgctctggggtcgcattcacaagggccag
tcgatcaccctcgacgatgggcgcgtcatcgagccgtcggtgctcgtgggtgagcgacgc
cgcggccgccgcatcgtcatcacgggtgacacgcgtccgtgcgagaacaccatcgcggcg
gcgcaggacgcagacctgctcattcacgaggcgacgttcgcggacgacgaagcggcgcgc
gcactcgagacgggacacagcacggcgcgcgaagccgccgaggtggcgcgcaaggcgggg
gcgcgacggctggtgctcacgcacatctcggcccgctactcgcgcgacgcgcacgaactc
gagcgcgaagcgcgctcagtgtttccgcgctcgagcatcgcgcgcgacggcacggagatc
gagttgtcgctcaccgaggagttggcggcggtgaccgaggcagaaggtgcgaacggcatc
gtgaactga
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