Gemmatimonas groenlandica: HKW67_04570
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Entry
HKW67_04570 CDS
T07783
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
ggr
Gemmatimonas groenlandica
Pathway
ggr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ggr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HKW67_04570 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ggr03400
]
HKW67_04570 (uvrB)
DNA repair and recombination proteins [BR:
ggr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HKW67_04570 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HKW67_04570 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
AAA_30
DEAD
UB2H
NACHT
AAA_22
Gins15_N
Motif
Other DBs
NCBI-ProteinID:
QJR34837
UniProt:
A0A6M4IN34
LinkDB
All DBs
Position
1109430..1111529
Genome browser
AA seq
699 aa
AA seq
DB search
MSAPFRLQSPFAPAGDQPRAIIELSKGLTRGDRFQTLLGVTGSGKTMTMANVIAQWGRPT
LVLSHNKTLAAQLYGELKSFFPTNAVEYFISYYDYYQPEAYVPSSDTFIEKDASINEDID
RLRLRATSSLMERDDVVIVSTVSAIYGLGDPVSYRERMVALSKGQQIARDDILRALVGIQ
YLRNDVAFDRGTFRVRGDTVEIYPAYEEQAVRLELWGDEIERISKIDPLSGETISTLERM
AIYPAKHFITNRPTIERASVAIREELAERLAELRTQGKLLEAQRLDQRTNFDLEMLAEIG
TCAGIENYSRHISGRAAGERPACLLDYFPDDYLVVVDESHVSLPQIRGMYNGDRARKLTL
VDYGFRLPSALDNRPLVFDEFIQLVPRLVNVSATPGELELQLSEGVVVEQVIRPTGLLDP
VLEIRSVKGQVDDLLHEIRIRERKGERVLVTTLTKRMSEDLTDYLQQVGVRVRYMHSDID
AIERMEIVRGLRLGEFDVLIGINLLREGLDMPEVSLVAILDADQEGFLRSDRSLIQTIGR
AARHLNGMAILYADRITGSMQRAIDETDRRRTIQREHNEKHGITPHGVLKSIDDVRLITR
VADARAPHEEATPTTKRLGAESAPRSREDLQTLVGELEVAMREAAIALDFEAAARLRDQL
FEVRTALGEKPEQARGNTAAPKRPPGSAPMRRAGGKRGR
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccccgtttcgactccagagtcccttcgcccccgccggcgatcagccgcgcgcg
atcatcgaactttctaaagggctgacgaggggcgaccgctttcagacgctgctcggcgtg
accgggtctggcaagaccatgacgatggccaacgtcatcgcgcagtgggggcggccgacg
ctggtgctgtcgcacaacaagacgctggcggcgcagctgtacggtgagctcaagtcgttc
ttcccgacgaacgcggtcgagtacttcatctcgtactacgactactatcagccggaagcg
tacgtcccctcgagcgatacgttcatcgaaaaggacgcgagcatcaacgaggatatcgat
cgactccggctgcgggcgacgtcgtcgttgatggagcgcgacgacgtggtcatcgtctcg
accgtatccgcgatctatggcctcggcgatccggtgtcgtatcgtgagcgcatggtcgcg
ctatcgaaaggccagcagatcgcgcgcgatgacatcctccgcgcgctcgtcggcattcag
tatttgcgcaacgatgtcgcattcgatcgcggtacgttccgcgtacgaggcgacacggtg
gagatctatccggcctacgaagagcaggcggtacgactcgagctctggggggacgaaatc
gagcgcatctccaagatcgacccgctttccggcgagacgatctcgacgctcgagcgcatg
gcgatctatccggcgaagcacttcatcacgaaccgccccacgatcgaacgggcgagtgtg
gctattcgtgaggagctggcggaacggctggccgagttgcgcacgcagggcaagttgctg
gaagcgcagcggctcgatcagcgcacgaatttcgatctcgagatgctcgccgagatcggc
acctgcgccggcatcgagaattattcgagacatattagcggccgcgcggccggcgagcgc
cctgcgtgtctgctcgactatttccccgatgactatctcgtcgtggtcgacgagtcgcac
gtgtcgctgccgcagattcgcgggatgtacaacggcgatcgcgcgcgcaagctcacgttg
gtcgactacggattccggctacccagtgcgctcgataatcgaccgctggtcttcgacgag
ttcatccagttggttccgcggctcgtgaatgtctcggcgacgccgggggaactggagctg
cagctctcggaaggcgtggtcgtcgagcaggtcatccgccccacgggcctcctggacccg
gttctggaaattcgttcggtgaaggggcaggtagacgacctgctccacgagattcgcatt
cgcgagcgaaagggcgagcgggtactggttacgacgctcaccaagcggatgtcggaagac
ctaaccgactatctgcagcaggtgggtgttcgggtgcgatacatgcactccgatatcgac
gccatcgagcgcatggaaatcgtgcgtgggttgcgcctcggtgaattcgatgtgttgatc
ggcatcaacctgctccgcgaaggactcgacatgcccgaggtctcgctggtggcgattctt
gacgccgaccaggaaggcttcctgcgcagcgatcggtcgttgattcagacgatcggacgc
gcagcgcgccatttgaacggaatggcgatcctatatgccgaccgcatcaccgggtcgatg
cagcgtgccatcgacgagaccgatcgtcgtcggacgattcagcgtgagcacaacgagaag
cacgggatcacaccgcatggcgtcctcaagagcatcgatgacgtccggttaattacgcgg
gtcgccgacgcgcgcgcgccgcacgaggaggccaccccgacaaccaagcgacttggcgcc
gagagtgcgccgcgctcgcgcgaggacctgcagacactcgtgggggagctggaagtcgcc
atgcgcgaagcggcgatcgccctcgatttcgaggcagcggctcgattgcgcgaccagctc
ttcgaagtccgaaccgcactcggcgagaagccggagcaggcacgcggcaacacggccgct
cccaagcgcccccccggcagcgcaccgatgcggcgcgccggaggcaagcgtggccgctga
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