Gemmatimonas groenlandica: HKW67_04980
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Entry
HKW67_04980 CDS
T07783
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
ggr
Gemmatimonas groenlandica
Pathway
ggr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ggr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HKW67_04980
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ggr01007
]
HKW67_04980
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ggr03016
]
HKW67_04980
Enzymes [BR:
ggr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
HKW67_04980
Amino acid related enzymes [BR:
ggr01007
]
Aminoacyl-tRNA synthetase
Class II (U)
HKW67_04980
Transfer RNA biogenesis [BR:
ggr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HKW67_04980
Prokaryotic type
HKW67_04980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
QJR34914
UniProt:
A0A6M4III9
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All DBs
Position
1196639..1199080
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AA seq
813 aa
AA seq
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MIVSHEWLKQFVPHTRSAQDIGDALSRHCVTLDHIERLGAELASFVVAQVVEAGRHPNSD
HLWVTKVDDGSGTLLDVVCGAPNVVVGTKYPFARTGTIMPGGLKIEKRKIRGETSNGMLC
SSRELGLGQEHDGILALETDAAPGTPLLDVLPIADARLDLDVLPNRPDLLSHVGVAREVA
AVLGVPMSERPAEIASAAPNVPVHGAPSSAAGAQATVRIDDAVSCPRYVAAVITGVQVGP
SPDWLRQRLESIGQRSISNVVDATNYVLHGLGQPVHAFDLAKLAGKGIVVRPTIDGESIV
TLDGTMRSLTAGTTVICDGERPVALAGLMGGLDSEVTATTTDVLLEVAVFEPRFVRRVRR
AVNLSTDASYRFERGIDGGNTLEVARTAAALITQVAGGQVVEFIDVGAPMAARSAVTVRP
SRLARVLGVVVAPSEIRHRLESLGCTVVEDAHGLVVTPPTWRHDLLIEVDLIEEVARLVG
FDTLPDELRPFRPGNAPDHPLHLAGRRVRDLLVGMGLAETRPMPFTSTGDEHTPRVRNPL
ADDEPFLRASIIDTLARRAEYNLTRMQGNLRLFEVGNVFIGTADRLPREEVRVGALIMGS
RRPAHFTEPQPPAFDLWDAKEIAVRVLSAAFPGQSATVVAGSTPAIWTLAVEGRGEVGRV
ETVALDRPVWASEAFGIEVTLGVMPSADVAAPRANGHDTSPVERQSPASAGVRFSALPTT
PAAEIDLALLVPDGVAAATVEQALRSAGGELLEQVTLFDEFRGAGVPEAHRSLGWRLTFR
HPERTLRDKEIEGRRARLLDLLDKELGIRPRAS
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtttctcatgaatggctcaaacagttcgtgccgcacacgcgttccgcgcaggac
atcggtgatgcgctcagccgacactgtgtcacgctagaccacatcgagcggctcggtgcc
gaactcgcgtcgttcgtcgtcgcgcaggtcgtcgaagccgggcgccatcccaattccgat
catctgtgggtgaccaaagtggacgatggcagcgggacgctgctcgatgtcgtctgcggc
gcgccgaatgtcgtggtcggcaccaagtatccgttcgcacgcaccggcacgatcatgccg
ggtggcctcaagatcgaaaagcgtaagattcgcggcgagacgagcaacgggatgctctgc
tcgtcgcgtgagctcggcctcggtcaggagcacgacggcatcctcgcgctcgagaccgac
gccgcgccgggcacaccgttgctcgacgtgctgccgattgccgatgcacgactcgatctc
gacgtgttgccgaatcgccccgatctgctgtcgcatgtcggcgtggcgcgcgaagtcgcc
gccgtgcttggcgtgccgatgtccgagcgtcccgccgagatcgcgtcggccgcgcccaat
gtgccggtgcacggtgccccgtcgagtgccgccggcgcgcaggcgacggtacggatcgac
gatgccgtcagctgtccgcggtacgtcgcggcagtgattaccggcgtccaggtcggcccg
agtcccgattggctgcgccagcggctcgagagcatcggacagcgcagcatcagcaacgtc
gtcgatgccaccaactatgtgctgcacggcctcggtcagcccgtgcatgccttcgatctc
gccaagctggcgggcaagggtatcgtggtgcggccaacgatcgatggtgaatcgatcgtg
acgcttgatggcacgatgcggtcgctcacggccggaacgacggtgatctgcgacggcgaa
cgtccggtcgccctggccggtttgatgggtgggctcgacagcgaagttacggccaccacg
acggacgtgctgttggaagtcgccgtcttcgagccgcgattcgtgcgtcgggtacgtcgc
gccgtcaatttatctaccgatgcctcgtatcgcttcgaacgcggtatcgacggcggcaac
acgctcgaggtggcgcgcacggccgccgcgctcatcacgcaggtcgccggtggtcaggtc
gtcgagttcatcgacgtgggtgcgccaatggccgcgcgcagtgcggtgacggtgcgtccg
tcacggctcgcgcgcgtcttgggtgtcgtcgtggcgccgtcggagattcgccatcgcttg
gagtcactcggctgcaccgtcgtcgaagacgcccacggtttggtcgtcacgccgcccacg
tggcgacatgatctgctcatcgaagtggacctgatcgaagaagtcgcgcgactcgttgga
ttcgatacactgcccgacgaattgcggccgttccggccgggcaatgcacccgatcatccg
ctgcatctcgccggtcgacgggtccgtgatctgttggtgggtatgggactcgccgagacg
cgaccgatgccgttcaccagcactggagacgagcatacgccgcgcgtgcgcaatcccctg
gccgatgacgaaccgttcttgcgcgcgtcgatcatcgacacgctggcccgacgtgcggag
tacaacctcacgcggatgcagggcaacctgcggttgttcgaggttggcaacgtcttcatc
ggcacagcggaccgactcccgcgtgaggaagtccgtgtcggcgccctgattatgggcagt
cgtcgtccggcccattttacggagccgcagccgccggcgttcgacctgtgggacgcgaag
gagattgccgtgcgcgtgctttcggcggccttccccggccagtcggccacggtcgtggcc
ggatcgacgcctgccatctggacgcttgccgtcgaaggacggggagaggtcggtcgtgtc
gagactgtcgccctcgaccggccggtgtgggccagtgaggccttcgggatcgaagtcacg
ttgggtgtaatgccctcggccgacgtggcggcgccgcgcgccaacgggcatgataccagt
ccggtggagcgtcaatccccggcttcggcgggcgtccgcttctcggcgcttccgaccacg
ccggcggccgaaatcgatctcgcgttgttggtaccggacggcgttgccgccgcgacggtc
gagcaggcgctgcgcagtgccggtggtgaactgctcgaacaggtcacgctgttcgacgaa
ttccgtggagccggtgtgccagaggcccatcggagcctggggtggcggttgacgttccgg
catccggagcgcaccctgcgggacaaggaaatcgaaggtcggcgcgcccgcctgctggat
ctcctcgacaaggaactcggtatccgtcctcgtgcgtcctga
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