KEGG   Gemmatimonas groenlandica: HKW67_04995
Entry
HKW67_04995       CDS       T07783                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
ggr  Gemmatimonas groenlandica
Pathway
ggr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ggr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HKW67_04995 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ggr03019]
    HKW67_04995 (rny)
Messenger RNA biogenesis [BR:ggr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HKW67_04995 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_PNO1_2nd KH_NusA_2nd KH_2
Other DBs
NCBI-ProteinID: QJR34917
UniProt: A0A6M4IN89
LinkDB
Position
1200069..1201655
AA seq 528 aa
MGEIPAAALVGALGFVAAVVAYVVGRQSWRKVETTEQQRALVVAEEGAVRVIDEAKREAE
TLRRGAIVAGKEEVLQLRESHEQDVRQRRVELEREEKRVLEREAQLDRARESLESREQEV
QRRGSELGRRETVATSKEQDLDKLIADERRKLEQLAGLSADQAKAELIRRLEDEALADAA
SRLREIRESAKRNADREAKKIVALAVQRVAAETTAESTVSAVSLPNDEMKGRIIGREGRN
IRAFELATGVDVIIDDTPDTVVVSCFDPVRRETARLALEKLVSDGRIHPGRIEEVVAKAR
KEVEVAIIETGEQAAYDVGVAGLHPELIKLIGRMKWRTSYGQNILSHSKEVAWLAGMMAA
ELGLDVALAKRGALLHDIGKVLTHEHEGTHVQLGVEVATKYGENPLVVNCIAAHHDDVPH
ESEVSVLVQAGDSISGSRPGARREAFETYVKRLEGLEKIASSYRGVERVFAIQAGREIRV
VVTPEQVDDTRMTALSEEIARRIESELQYPGQIKVVVIRESRAVDFAR
NT seq 1587 nt   +upstreamnt  +downstreamnt
atgggcgagattcccgcagcggcgctagttggcgcccttgggtttgtcgcggctgtcgtc
gcgtacgttgtcggacgacagtcgtggcgtaaggtggagacgaccgaacaacagcgagcg
ctcgtcgtcgccgaagagggcgcggtgcgcgtcattgatgaggcgaaacgcgaagcggaa
acgctcaggcggggcgcgatcgtcgcaggtaaggaggaagtacttcagctccgggagtcg
cacgagcaggatgtgcggcaacgtcgcgtcgagctcgagcgcgaggagaagcgggtgctc
gagcgcgaagcccagctcgaccgtgctcgcgagtcactcgagagccgcgaacaggaagta
cagcggcggggatccgagctcgggcgacgagagacggtggccacgtcgaaggagcaggac
ctcgacaagctcatcgcggacgaacgtcgcaaactcgaacagttggcgggcctcagcgct
gaccaggcgaaggccgagctgattcgtcggcttgaagacgaagcgctggctgacgcagcg
agtcggctgcgcgagattcgcgagtcggccaagcgcaacgcggaccgggaggccaagaag
atcgtggcgctcgcggtgcaacgtgtcgctgccgaaacgacggccgagagcacggtgtcg
gccgtttcgctgccgaatgacgagatgaagggacgcatcatcggccgcgagggacggaac
atccgcgccttcgaactggcgaccggcgtggacgtgatcatcgatgacacgccggacacc
gtggtggtgtcctgcttcgatccggttcggcgcgaaacggcacgcctcgctctcgagaag
ctcgtgagcgacggccgcatccatccggggcgcatcgaagaagtggtcgcgaaggcgcgc
aaggaggtcgaagtcgcgatcatcgaaaccggtgaacaagccgcctacgacgtcggtgtg
gcgggattgcatcccgaactcatcaagctcatcggccgcatgaagtggcgtaccagctac
ggccagaacatcctgtcgcattcgaaagaagtcgcgtggctggccggcatgatggccgcc
gagctcgggctggatgtcgcgctcgccaagcgcggcgcgctgttgcacgacatcggcaaa
gtgctcacgcatgagcacgaaggcacgcacgtccagctcggcgtcgaagtcgccaccaag
tacggcgagaatccgttggtggtgaattgcattgcggcccaccacgacgacgtgccgcac
gagagtgaggtgtcggtgctcgtgcaggccggcgacagtatttccgggtcgcgccccggt
gcgcggcgcgaggctttcgagacctacgtgaagcggctggaaggactggagaagatcgcc
tcgagctatcgcggcgtggagcgggtgtttgcgatccaggccggccgagagatccgcgtc
gttgtcacgccggaacaggtggacgacacgcggatgaccgcgctctccgaagagattgcg
cgtcgcatcgagtccgagctccagtatccggggcagatcaaagtcgtggtcatccgagag
agccgggcggtggattttgcgcgctga

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