Gemmatimonas groenlandica: HKW67_05005
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Entry
HKW67_05005 CDS
T07783
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ggr
Gemmatimonas groenlandica
Pathway
ggr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ggr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HKW67_05005 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ggr03400
]
HKW67_05005 (xseA)
Enzymes [BR:
ggr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HKW67_05005 (xseA)
DNA repair and recombination proteins [BR:
ggr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HKW67_05005 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Apolipoprotein
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
QJR34919
UniProt:
A0A6M4IM91
LinkDB
All DBs
Position
1202535..1203776
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AA seq
413 aa
AA seq
DB search
MAGRRASGYQSYGPPVPSDEAPGSAPESAIAVHTLTSAAKDLIEGAFPPLWVRGEVSDFK
AHRNGHWYFALRDAEAQVKCVIWSSAAKRIPAPPDDGMQVLAYGQMTVWPVRGDLQFSVR
ALEAEGDGLWRKALERTRLSLEKDGLLDPARKRALPAFPRRIAVITSPDGAAMHDIITVA
RARSADVEIVIVAAKVQGEGAPESLVAAIERVSRWQDADVLIIGRGGGAREDLWAFNDER
VARALAACPIPTISAVGHEVDVTICDLVADVRAATPSAAAELAVPSRREVIARVESLGNR
LAAAARRREERAIASLAQVQKRLGLAATRIVERRRSRVESLAGQLHALSPLSTLARGFAV
ARTPAGATLSGRDQFVSGAPFDLWLRDGIVSAIAGTGRSLPESVPGFPPEEGV
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggctgggcgccgcgcgagcggatatcagagctacggaccgccggtgccctccgacgaa
gcaccgggcagcgcgccggaatcggcgatcgccgtgcacacgctcacgagtgcggccaag
gatctgatcgagggggcgtttccaccgttgtgggtgcgcggtgaggtcagcgatttcaag
gcgcatcggaacgggcattggtatttcgccttgcgcgacgccgaggcgcaggtgaagtgc
gtgatctggagttcggccgccaagcgcattccggcgccgcccgatgacggcatgcaggtg
ctcgcctacggtcagatgacggtctggccggtacgcggcgatctgcaattttccgtgcgc
gcgctcgaggccgaaggcgatggtctgtggcgcaaggcgctcgaacgtacgcgcctgagc
ctcgagaaggacgggctcctcgatcccgcccgcaagcgcgcgctgccggcgttcccgcgg
cgcatcgccgtgatcacgagccccgatggcgcggcgatgcatgacatcatcaccgtcgcg
cgcgcgcgcagcgccgacgtggagatcgtgatcgtcgccgccaaggtacagggcgagggc
gcgccggaatcactcgtggccgcgatcgaacgcgtgagccgttggcaggacgccgacgtg
ctcatcatcggacgtggaggcggtgcacgcgaggacttgtgggcgttcaacgacgagcgc
gtggcccgggcactagcggcgtgtccgatccccacgatctcggccgttggccacgaggtc
gacgtcaccatctgtgacctggtggccgacgtgcgcgcggctacgccgtcggccgcggcc
gaactggccgtgccgtcgcgtcgcgaagtcatcgcccgtgtcgagtcgctcggaaatcga
ctggccgccgccgcgcggcggcgtgaggagcgcgccatcgcatcgctggcccaggtgcag
aagcggttggggctcgccgcgacgcgcatcgtggagcgtcgtcgctcccgtgtcgagtct
ctggccggtcagcttcatgcgctctcaccattgagcacgttagcgcgcggttttgcggta
gcgcgaacgcccgcgggcgctactttgagcggacgggatcagttcgtatcgggagcccca
ttcgatctgtggctccgggacggcattgtgtcggcgatcgccgggacggggcgttcgctc
cccgagtcggttccagggtttccacctgaggagggcgtatga
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