Gemmatimonas groenlandica: HKW67_05200
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Entry
HKW67_05200 CDS
T07783
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ggr
Gemmatimonas groenlandica
Brite
KEGG Orthology (KO) [BR:
ggr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ggr03000
]
HKW67_05200
Transcription factors [BR:
ggr03000
]
Prokaryotic type
Helix-turn-helix
Other families
HKW67_05200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
AAA_5
AAA
HTH_8
AAA_16
Mg_chelatase
AAA_2
HTH_30
AAA_3
HTH_23
HTH_28
AAA_7
MCM
HTH_24
HTH_7
Motif
Other DBs
NCBI-ProteinID:
QJR34951
UniProt:
A0A6M4IRR8
LinkDB
All DBs
Position
complement(1250538..1252766)
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AA seq
742 aa
AA seq
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MTTGTGGGMRLHEMLPVERSAQRSLTAAWQRVMRDGAQALEQLDTVRTPVKASWARALQR
GIHPSLPRAPFQLDDRSLAALRDDVDWLPHADLAVRAHAGGSALEGHILALFDANARMLA
ATGDPKALEGLADINFRPGALWSEEAVGTNGPGTALALARAVHIVGAEHFCERWQGWHCA
AAPIRDPLTQEVLGVLDLSGLRERAHPHTLSLVSAIAVALEQRLVARESERRVTLLRRFG
ALVGQYPGDAILVVDRAGEIIASSSPAERLVRRLAASGRDATDALRRISTESDVAPRAPT
GSSRAGSRELPSQSVVRDATHPLLGVMAAVHAMRDGRTPIGACVVLPAGQTRGQRPADTR
HTGSRTPYTESRAESRAAADTPSRTTTNPAVHTALVSSLVPPRGASAVRYTMDALFGRAA
VLDDVRRFARACARTDLPVLLLGESGTGKEVVAQGIHAASPRAQAPFVAVNCAALPRELV
ESELFGHVAGAFSGARRDGAIGKFEAADGGTLFLDEIGELPPAAQAALLRVLQEGEITRL
GATAGRRVDVRIIAATNRDVTNAIASGTLRDDLYHRLNVLTIALPPLRTRHGDAVLLAEH
FLAQTHGTLAREFSPRVRAAFERYRWPGNVRELENLVKRLAALAEGPTITEELLPAALRE
VVDAAPSAAADFIEASAFDTLDDTSAAVESHRQALRARYATLIAGHATMSDAAKSIGITR
STLYRRLQRIGLAPGRGVRDSS
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgggcacagggggcgggatgaggctgcacgagatgttgccggtcgaacggagt
gcccagcgatccctcaccgccgcgtggcagcgcgtgatgcgcgacggtgcgcaggcgctg
gagcagctcgacacggtgcgcacgccggtcaaggcctcgtgggcacgggcgcttcaacgc
ggcattcacccttcgctgccgcgcgcaccgttccagctcgacgaccgctcattggccgcc
ctgcgtgacgatgtcgattggctgccgcacgccgatctcgccgtgcgcgcgcacgctggt
ggttcagcgctcgaaggccatatcctcgcgttgttcgacgccaacgcccgtatgctcgcg
gccaccggcgacccgaaagcactcgagggattggccgacatcaattttcgtccgggcgcg
ctctggagcgaggaggccgtcggaacgaacggaccaggaaccgcgctcgcactcgcgcga
gctgtgcacatcgttggcgcagagcatttctgcgaacgctggcaaggctggcactgtgcc
gctgcgcccattcgggatccgctcacgcaggaagtgctcggcgtgctcgatctctccggg
ctgcgggagcgggcgcatccgcacacgctgtcgctcgtcagcgcgatcgccgtggcgctc
gagcagcggctcgtggcacgggaatcggaacgccgcgtcaccttgctgcggcgattcggt
gcgctggtcggccagtatcccggtgacgcaatcctcgtggtggatcgcgccggggaaatc
atcgcgtcatcgtcgccggccgagcgcctggtacgtcggctagcggcgtccggtcgcgac
gccaccgacgccttgcgccgcatcagcacagaatccgacgtggccccccgagcgccgacc
ggcagctcgcgtgcgggcagccgggagctgccgagccagtcggtcgtgcgcgatgcgacg
catccgctgctcggggtgatggccgccgttcacgcgatgcgcgatggacggacgcctatc
ggcgcttgcgtcgtgctcccggccggtcagacgcgaggccagcgaccagccgatacgcgc
cacacgggctcgcgcacgccgtacacggagtcgcgtgctgagtcgcgtgcagccgctgac
acgccatcgcgtaccaccacgaatccggcggtgcacacggccctcgtgtcatcgctcgtg
ccgccgcgcggcgcgtccgccgtgcggtatacgatggacgcgctattcggtcgcgccgcg
gtactcgacgacgtgcgccggttcgcccgcgcctgcgcccggacggatttgcccgtcctc
ttgctcggcgagtcgggcaccggaaaggaagtggtcgcacaaggcattcatgccgcgagt
ccgcgggcgcaggcgccgttcgttgccgtgaattgcgcggcgttgccccgcgaactcgtc
gagagcgaactgtttggccatgtcgccggcgcgttctccggcgcacggcgcgacggcgcc
atcggcaagttcgaagcggccgacgggggcacgctgttcctcgacgaaatcggtgagctt
ccgccggcggcgcaggcggccctgctgcgcgttctgcaggagggcgagatcacgcgcctc
ggtgctacagccggacgccgagtggacgtgcgcatcatcgccgcgaccaaccgagacgtc
acgaacgcgatcgccagcggtaccctgcgcgatgacctgtatcatcggctcaatgtgctc
accatcgccttgccaccgttgcggacgcgtcacggcgacgccgtgctgttggccgagcat
tttctggcgcagacgcacggcacgctcgcccgagaattttcaccgcgggtccgggcggcg
ttcgagcggtatcggtggcccggcaacgtacgcgagctcgagaatctcgtgaagcggttg
gcagcgctggccgaaggcccgacgattaccgaggagctcctgccagccgcgttgcgcgag
gtcgtcgacgccgcaccgtcagcggcggctgatttcatcgaggcgtcggcgttcgatacg
ctggacgacacctcggccgccgtcgaatcccatcggcaggcgctccgtgcgcgctacgcc
accttgatcgccgggcacgcaacgatgagcgacgcggcaaaatccatcgggatcacgcgg
agcacgctttaccggcgactgcagcgcattggtcttgcccctggtcgtggtgtgcgcgac
tcgtcgtag
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