Gemmatimonas groenlandica: HKW67_08505
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Entry
HKW67_08505 CDS
T07783
Name
(GenBank) SpoIID/LytB domain-containing protein
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
ggr
Gemmatimonas groenlandica
Brite
KEGG Orthology (KO) [BR:
ggr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ggr01011
]
HKW67_08505
Enzymes [BR:
ggr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HKW67_08505
Peptidoglycan biosynthesis and degradation proteins [BR:
ggr01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HKW67_08505
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SpoIID
Motif
Other DBs
NCBI-ProteinID:
QJR35544
UniProt:
A0A6M4IKG8
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All DBs
Position
complement(2015953..2017281)
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AA seq
442 aa
AA seq
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MRSLIAGAFGTLVAAAAFTVACAPRGGSMGPSAPTPVMQGPITGEAHGRLDGRDRMARIA
LAGKAQQAPVSATGRWRIDEQGGRTKLVTGQGAENWRVEQQGGLLRVAGDNGDATPWREG
PFVARAVDGGSALRYDNRRYRGELWFTPTDSGILVVNRLPVEEYLRGVVPIELGTRQPAD
RAALEAQAIAARSYAYIRVPSDESVEPRSGWHMVATVQNQVYAGLDVEAPIVNEAIDNTA
GLVIRYNGLLVDAPYYSSCGGRTAAPKESWRDVREEPYLQSVDDTDPRTGRPYCDISPRN
HWTAEFDEAQLSETVRRALVAAGARDPRPGVVTEMRVEGRTASGRATALVLRTDRGDVTV
RNNEIRNVLRDARGAILSSTYFSVDRESRARGHLTGVSLHGHGNGHGVGMCQWGAIGRSR
AGIDARTILRHYYPGTVVGFAD
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcgctcatcgctggtgcctttggtaccctggtagccgccgccgccttcacggtg
gcatgcgcgccgcgtgggggcagcatgggccccagcgcacccacgccggtgatgcaaggt
ccgatcaccggcgaagcgcacgggcgattggatggacgagaccggatggcgcgtatcgcg
ctggccggcaaggcgcagcaggcgccggtgtcggccacgggacggtggcgcatcgatgag
caaggtggacgcacgaagctggtgacggggcagggcgccgagaactggcgtgtggagcag
cagggcgggttgttgcgggtggccggggataacggcgatgccactccgtggcgcgagggg
ccgttcgtggcccgcgcggtcgacggcggctcggcgctgcgctacgacaatcggcgctat
cgcggcgagctctggttcacaccgaccgacagcggcattctggtggtgaaccggctgccg
gtggaggagtacctgcgcggcgtggtgccgatcgaattgggcacccggcagccggcggat
cgcgctgcgctggaagcacaggcgattgccgcacgaagctacgcgtacattcgtgtgccg
tcggacgaatcggttgagccgcgctcggggtggcacatggtggccacggtgcagaatcag
gtgtatgccggtctggacgtggaggcaccgatcgtgaatgaagcgatcgacaacacggcc
ggattggtgatccgctacaacgggttgctggtggacgcgccgtactactcatcgtgcggc
gggcggacggcggcgccgaaggaatcgtggcgggatgttcgtgaggaaccctatctgcag
tcggtggacgacaccgatccgcgcaccgggcgcccgtactgcgacatttcgccccggaat
cactggacggcggagtttgacgaagcgcagctgagcgagaccgtgcggcgggccctggtg
gcggccggcgcgcgcgatccacgccccggcgtggtcacggagatgcgggtggagggtcgg
acggcgtcggggcgcgccacggcgctggtgctgcgcaccgatcgcggtgacgtgaccgtg
cgcaacaatgagatccgcaatgtgctgcgtgatgcgcgtggcgcgatcctgtccagcacg
tatttttcagtggaccgcgaatcccgtgctcgtggacacctgaccggtgtcagcctgcac
ggccacggcaacggccacggagtggggatgtgtcagtggggagcgatcggccggtcacgg
gccggcatcgacgctcgcacgatcctgcgtcattactatccggggaccgtcgtcgggttc
gccgactga
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