Gemmatimonas groenlandica: HKW67_10245
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Entry
HKW67_10245 CDS
T07783
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ggr
Gemmatimonas groenlandica
Pathway
ggr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ggr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HKW67_10245 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ggr03400
]
HKW67_10245 (priA)
Enzymes [BR:
ggr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HKW67_10245 (priA)
DNA repair and recombination proteins [BR:
ggr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HKW67_10245 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
SLFN-g3_helicase
AAA_19
AAA_22
AAA_16
zf-CHY
AAA_11
PBP_like
PIF1
GvpD_P-loop
SWI2_SNF2
TrwB_AAD_bind
T2SSE
DUF6276
Zn_Ribbon_YjdM
Motif
Other DBs
NCBI-ProteinID:
QJR35863
UniProt:
A0A6M4IMG0
LinkDB
All DBs
Position
complement(2432793..2435042)
Genome browser
AA seq
749 aa
AA seq
DB search
MALAAPLFRTFTYRVPDGIAVPIAPGTRVLVSFRNRPEIGICLGATVPPDGITLKPIQAV
VDDVPSLPASLLHTGKWIADWYAAPLGLTLRSMLPTALTSAKAPAPASRTQRMVRIVMDL
PSLLQREQTFARAKQQRVVYDLLEAQGGAAPLESLRIQANCSAGVFTAMAKRGLVDIRDE
VQQRDPFADRAGTLPPPNPSEAQREAVRAILAGDPGQVFLLHGVTGSGKTLVYIEVLRAV
LQQRDKTAIVLVPEIALTSQTVDRFRGAFGDDVAVLHSGLSDGERLDAWQSLRRGERRIA
VGARSALFAPLERVGVVIVDEEHESSYKQSETPRYHAREAAIVRARAEGAVVVLGSATPS
LETWERADRGQAIRLTLPDRAAGAQLPPVTVVDMRVELKQAVKERNPNAPFDETLGVFSK
SLLVALEQRLVRGEQSLLLLNRRGYSSFMQCNACGDVPVCPHCSISLTYHRVPEMLVCHY
CQHQQPVPAVCAQCSADTMRRRGLGTQQVERVLSERFPEARIARMDVDTTSGKWAHTQIL
DRVGRGEVDILLGTQMIAKGLDFPNVTLVGVVDADTGLNLPDFRAAERTFQLVSQVAGRA
GRGPKGGDVIIQTRMPNSHAIRHAITHDVTGFVREELGARRMPAYPPFVSIANVLVSGLD
QAATAATAVAAASWVQRLVERQGLRDLVFVGPAPCPIDRIKDRWRWHFLLKSSQPKLMTR
VARYIAERCPVPKMHELRLTVDRDPVSLL
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
gtggcgctggctgcgccactgttccgcacgttcacctatcgcgtgcccgatggcatcgcg
gtgccgatcgcgcccggcacgcgtgtgttggtctcttttcgtaatcgccccgagatcggg
atctgtctgggggccactgtgccgcccgacgggatcacgctcaagccgattcaggccgtc
gtggacgatgtgccgtcgctgccggcatcgctgctgcataccggcaagtggattgccgat
tggtacgccgcgccactcggcctcaccctgcgctccatgctgcccacggcgctcacgtcg
gccaaggcgccggcgccggcatcgcgcacgcagcggatggtgcgcatcgtgatggatctg
ccgtcgctgttgcagcgcgagcagaccttcgcccgcgccaagcagcagcgcgtcgtatac
gacctgctggaagcacagggcggcgcggcgccactggagtcattgcgcatccaggccaac
tgcagcgccggcgtgttcacggcgatggcgaagcgcggtctcgtggacatccgtgacgag
gtgcagcagcgcgatccgttcgccgatcgtgccggtacgctgccgccgcccaatccgagc
gaggcgcagcgggaggcggtgcgcgcgatcctcgccggtgatccagggcaggtgtttctg
ctacatggggtcaccggcagcggcaagacgttggtgtacatcgaagtgctgcgcgccgtg
ctgcagcagcgtgacaagacggcgatcgtgcttgtgcccgagatcgccctcacctcgcaa
acggtcgaccgattccgcggcgccttcggcgacgatgtggcggtgttgcattcgggcttg
agtgatggggaacggcttgatgcgtggcaatcgctgcgtcggggggaacggcgtattgcc
gtgggtgctcgctcggcgctgtttgcgccactcgagcgcgttggtgtcgtgatcgtcgac
gaggaacacgagagcagctacaagcaatcggagacgccgcgctaccatgcgcgcgaagcg
gcgatcgtgcgcgcgcgggcggaaggcgcggtggtggtgctgggcagcgccacgccgagc
ctggaaacgtgggaacgcgccgatcgcggtcaggctatccggctcacgctgcccgaccgc
gctgccggggcgcagctgccgccggtgaccgtggtggatatgcgcgtagagctcaaacag
gcggtgaaggaacgcaatcccaatgcgccatttgacgagacgctgggtgtgttcagcaag
tcgttgctggtggcacttgagcagcggctcgtacgcggtgagcagagcctgctactgctg
aaccgacgcggctattcgagcttcatgcagtgcaacgcctgtggtgatgtgccggtgtgt
ccgcattgcagcatctcactcacgtatcatcgcgtgcctgagatgctcgtctgtcactac
tgtcagcatcagcagccggtgccggcggtgtgtgcgcagtgttcggctgacacgatgcgc
cggcgcggactgggtacgcagcaggttgagcgtgtgctctccgagcgctttcccgaggcg
cgtattgcgcggatggatgtcgataccaccagcggcaagtgggcgcacacgcagattctc
gatcgcgtgggccgtggcgaggtggacatcctgctgggcacgcagatgatcgcgaagggg
ctcgactttccgaacgtcacactggtcggcgtcgtcgatgccgatacggggctgaatctt
cccgacttccgcgcggccgagcgcacgttccagctggtcagtcaggtcgcgggacgtgcg
ggccgtggacccaagggcggcgacgtgatcattcagacacgcatgccgaacagtcatgcg
atccgtcacgccatcacgcacgacgtcaccggcttcgttcgggaagagttgggggcgcga
cggatgccggcgtatccgccattcgtgagcatcgcgaacgtgctggtcagcggtcttgac
caggcggcgacggcagcaacggcggtggctgcggccagttgggtgcagcgactggtcgaa
cgtcaggggctccgcgacctcgtgttcgtcggtcccgccccgtgccccatcgaccgcatc
aaggatcgctggcgctggcattttctccttaagtcgtcacagcccaagctgatgacgcgc
gtggcgcggtatatcgccgaacgctgcccggtgccgaagatgcacgagctgcggctcacg
gtcgaccgcgatccggtgtcgctgctgtag
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