Gemmatimonas groenlandica: HKW67_10890
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Entry
HKW67_10890 CDS
T07783
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ggr
Gemmatimonas groenlandica
Pathway
ggr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ggr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HKW67_10890 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ggr03400
]
HKW67_10890 (uvrA)
DNA repair and recombination proteins [BR:
ggr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HKW67_10890 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HKW67_10890 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_16
nSTAND1
AAA_29
AAA_21
AAA_25
RsgA_GTPase
AAA_22
APS_kinase
AAA_33
nSTAND6
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
NB-ARC
DUF463
DUF87
Motif
Other DBs
NCBI-ProteinID:
QJR35973
UniProt:
A0A6M4IMQ7
LinkDB
All DBs
Position
complement(2566921..2569833)
Genome browser
AA seq
970 aa
AA seq
DB search
MSEPVRPSDALVVRGAREHNLRNISVTIPRDKLTVVTGLSGSGKSSLAFDTIYAEGQRRY
VESLSAYARQFLGLMEKPDVDAIEGLSPAISIEQKSAGHNPRSTVGTVTEVYDYLRLLYA
RTGTPHCPNCGRAVQRQSPTQIAEMVLAWPEGTRLEIRAPLVQERKGEFKDLFESARKQG
FVRAVVDGELIELADPPKLNRRLNHSVSVVVDRLVVRTEDRGRITDSLETALRLAEGLAE
VVRYDGSEPVTEMFSERYGCATCGISMPELEPRHFSFNSPFGACEMCSGLGTTRTVSEEL
MLGDPSISILEGVVLPWGEPDGYMRKVILPGLAKQLGFDLNKPWGQIPAKVRQQLLHGVG
DAPPRARKAVKKAVKGAVAKTAAKTAAKAAAESTWEGIVAHVQRRYDESSSDGVRLDLES
FMVAGPCPACEGRRLRPQSLAVTVHGLNIGQVVERSVVDSLAFFETVPVRSAGHPGLDPG
IAGPILKEVRERLRFLVDVGLDYLTLNRSAESLSGGEAQRIRLATQIGSRLVGVLYILDE
PSIGLHQRDNGRLLSTLKALRDLGNTVIVVEHDEETIREADYLIDLGPGAGKHGGEVIAA
GSVQDVIDTPASITGQYLRGTRRIDVPVQRRKRDVARMLTVQGAREHNLRDVTAEFPLGL
FVAVTGVSGSGKSTLVTDILQRTLSRHFFRARVLPGAHTRITGLEHLDKIIDIDQSPIGR
TPRSNPATYTGIFTPVRELFAELPESKIRGYGPGRFSFNVKGGRCESCQGDGLVKIEMHF
LPDVFVPCDVCKGKRFNRETMEVHFRGRSIAEILDLTVEEACTVFENQPRILQKLETLRD
VGLGYIHLGQSATTLSGGEAQRVKLATELSKRDTGRTLYILDEPTTGLHFEDVRVLLGVL
HKLVERGNTVLVIEHNLDVIKTADWIVDLGPEGGVRGGTIVAQGTPEEVARVKESHTGRY
LAPMLSSTGA
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaccggtccgtccgtccgatgcgctcgtggtgcgtggtgcccgcgagcataac
ttgcgcaacatcagcgtcaccatcccacgcgataagctgacggtcgtgaccggcttgtcc
ggctccgggaagtcgtcgctcgcgttcgatacgatctacgccgaagggcagcgacgctac
gtcgagtcgctctccgcgtacgcgcgacagttcttggggctgatggagaagcccgatgtc
gacgccatcgaggggctctctccggccatctcgatcgagcagaagtcggccggtcacaac
ccgcgctcaaccgtggggacggtgacggaagtgtacgactatctgcgcttgctctacgcg
cgcaccggtacgccgcattgcccgaattgcggacgtgccgtgcagcgacagagccccacg
cagatcgccgaaatggtgctggcttggccggaaggcacgcgcctcgagattcgcgcgccg
ctggtgcaggagcgaaagggcgagttcaaggatctgttcgaaagtgcgcggaagcagggc
ttcgtgcgggccgtcgtcgatggtgaactcatcgagttggccgatccgccgaagctgaac
cggcgtctcaatcactccgtgtcggtcgtcgtcgatcgcctggtcgtgcgcacggaagac
cgtggtcgcatcacggactcgctggaaacggccttgcgactggctgaaggactcgccgaa
gtcgtgcgctacgatggctcggagccggtcaccgaaatgttctcggagcgctacggctgc
gccacgtgcggcatttccatgccggaactcgagccacgtcacttctcgttcaattcgccg
ttcggcgcctgcgagatgtgcagcgggctgggcaccacgcgaacggtcagcgaagaactg
atgttaggcgatccgagcatctcgatcctcgagggcgtcgtgctgccctggggagagccc
gacggctacatgcggaaggtgatcctgcccggtctcgccaagcagttgggcttcgatctc
aacaagccatggggacagatcccggccaaggtgcgtcagcagctgctgcacggtgtcggt
gatgcgccgccgcgtgcgcgcaaggcggtcaagaaggcggtgaagggagcggtggcgaag
acggcggccaagaccgccgcgaaggcggccgccgagagcacctgggaaggcatcgtcgcg
catgtgcagcgtcgctatgacgagagcagctctgacggtgtacggctcgatctcgagtcg
ttcatggtggcgggaccgtgcccggcgtgcgaaggccgacggctgcgccctcaatcgctg
gcggtaaccgtgcacggtctcaacatcgggcaggtcgtcgaacgcagcgtcgtcgattcg
ctggcgttcttcgaaaccgtgcccgtgcgcagcgctggtcatccgggactcgatcccggt
attgccggtccgattctcaaggaagtgcgcgagcggctgcgctttctggtggatgtcggg
ctcgactacctcacactcaatcgcagcgccgagtcactgtcaggaggcgaagcgcagcgc
atccggctcgcgacgcagatcggatcgcgtctcgttggcgtgctgtacatcctcgacgag
cccagcatcggcttgcatcagcgcgacaacggccggttgctctctacgctcaaggcgctc
cgcgatctcggcaacaccgtgatcgtcgtcgagcacgacgaggagacgatccgtgaggcc
gattacctcatcgatctcggccccggcgccggcaagcacggcggtgaagtgatcgccgcg
ggatccgtgcaggatgtcatcgatacgccggcatcaatcacggggcagtacctgcgcggc
acccgccgcatcgacgtaccggtgcagcgccgtaagcgagacgtggcacggatgctcacc
gtgcaaggagcgcgggagcacaacctgcgcgatgtcaccgccgagttcccgctgggtttg
ttcgtggcggtcaccggcgtttcagggtcgggcaagtccacgctcgtcaccgatattctg
cagcgcacactgtcgcgtcacttcttccgggcacgcgtgctgccaggtgcacacacgcgc
attactggcttggagcatctcgacaagatcatcgatatcgaccaaagcccgatcggtcgc
acgccacgctcgaatccggccacgtataccggcatcttcacgccggttcgtgaactcttc
gcagaactgcctgaatcgaagattcgcggctacggacccggtcgcttctcgttcaacgtc
aagggtggacggtgcgagagctgtcagggcgacggactcgtgaagatcgaaatgcacttt
ctccccgatgtgttcgtgccctgtgatgtgtgcaagggcaaacgcttcaatcgcgagacg
atggaagtgcacttccgagggcgcagtatcgccgagattctcgatctcactgtcgaggag
gcgtgcacggtgttcgaaaatcagccgcggatcctgcagaagctcgaaacgctgcgcgat
gtcggattggggtatatccaccttggacagagcgcgacgacgctctcgggtggcgaagcg
cagcgcgtcaagctggcgaccgagctctcgaagcgtgatacgggtcgcacgttgtacatc
ctggacgagccgaccaccgggttgcacttcgaggacgttcgcgtgttgttgggtgtgctg
cacaagctggtcgagcgcggaaacacggtgttggtgatcgagcacaatctcgatgtgatc
aagaccgccgactggatcgtcgatctgggaccggaaggtggcgtgcgcggcggtaccatc
gtggcacagggcactccggaagaggtcgcccgcgtgaaggagagccacaccgggcgctat
ctggcgccgatgctgtcaagcactggtgcgtga
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