KEGG   Gemmatimonas groenlandica: HKW67_11210
Entry
HKW67_11210       CDS       T07783                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ggr  Gemmatimonas groenlandica
Pathway
ggr00010  Glycolysis / Gluconeogenesis
ggr00020  Citrate cycle (TCA cycle)
ggr00260  Glycine, serine and threonine metabolism
ggr00280  Valine, leucine and isoleucine degradation
ggr00310  Lysine degradation
ggr00380  Tryptophan metabolism
ggr00620  Pyruvate metabolism
ggr00630  Glyoxylate and dicarboxylate metabolism
ggr00640  Propanoate metabolism
ggr00670  One carbon pool by folate
ggr00785  Lipoic acid metabolism
ggr01100  Metabolic pathways
ggr01110  Biosynthesis of secondary metabolites
ggr01120  Microbial metabolism in diverse environments
ggr01200  Carbon metabolism
ggr01210  2-Oxocarboxylic acid metabolism
ggr01240  Biosynthesis of cofactors
Module
ggr_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ggr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ggr_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ggr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    HKW67_11210 (lpdA)
   00020 Citrate cycle (TCA cycle)
    HKW67_11210 (lpdA)
   00620 Pyruvate metabolism
    HKW67_11210 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    HKW67_11210 (lpdA)
   00640 Propanoate metabolism
    HKW67_11210 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    HKW67_11210 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    HKW67_11210 (lpdA)
   00310 Lysine degradation
    HKW67_11210 (lpdA)
   00380 Tryptophan metabolism
    HKW67_11210 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    HKW67_11210 (lpdA)
   00670 One carbon pool by folate
    HKW67_11210 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ggr04147]
    HKW67_11210 (lpdA)
Enzymes [BR:ggr01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     HKW67_11210 (lpdA)
Exosome [BR:ggr04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   HKW67_11210 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 HI0933_like GIDA DAO FAD_oxidored FAD_binding_2 3HCDH_N NAD_binding_8 AlaDh_PNT_C 2-Hacid_dh_C Lys_Orn_oxgnase Thi4 FAD_binding_3 Trp_halogenase Lycopene_cycl UDPG_MGDP_dh_N ThiF NAD_binding_7
Other DBs
NCBI-ProteinID: QJR36036
UniProt: A0A6M4IRJ7
LinkDB
Position
2647592..2648995
AA seq 467 aa
MALFDVIILGGGPAGYVCAIRCAQLGMQVAVIEREALGGTCVLWGCIPAKSLLESAGLAV
KLGKAAEHGITIDGITLDFGPAMKRSRSISAQNSKGVEFLFKKYKVQWIRGEGVIEKGKK
VSVTLADGKKETHEAKKAVVIATGSRVKGLPQAGLELDKNVVLSSDDVLVAEKAPASMVV
VGAGAVGVEFADVFAAFGTKVTMVEVAPTILPIEDADCSAELAKAFKKRKIDVLTGAKIT
STKVTKTGATLVVEAGGTTHTLEVEKVLVAAGRAPNVEKIGLEAVGIAKSERGFVKINPK
FETNVSGYYAIGDVAGNQMLAHKGSREGHVLADLLGGEHPHLVNYNNIPSCTYCHPEVAS
IGLTEQACKDQKLDYKVGKFPFSANGRARTSGETDGFVKIIRDAKYGEILGAHIVGAHAT
EIIHELVVARENEFTVEEIDLAVHAHPTLSEAIGEAVLDSLGKMLHA
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggctttgttcgacgtcattattcttggcggcggtcccgccggctacgtctgcgccatc
cgctgcgcccagctgggcatgcaggtggccgttatcgaacgcgaagcgctcggcggcacc
tgcgtgctgtggggctgcatcccggccaagtcgctgctcgaaagcgccggcctcgcggtc
aagctcggcaaggccgccgaacacggcatcaccatcgacggcatcacgctcgacttcggc
ccggcgatgaagcgctcacgcagcatcagcgctcagaactccaagggtgtcgagtttctg
ttcaagaagtacaaggtgcagtggatccgcggtgaaggcgtgatcgagaagggcaagaag
gtgagcgtcacgcttgccgacggaaagaaggagacgcacgaggccaagaaggccgtggtg
atcgccaccggatcgcgcgtgaaggggctgccgcaggctggcctcgagctcgacaagaac
gtcgtgctctccagcgacgacgtgctcgtcgccgagaaggcgccggcgtcgatggtggtg
gtgggcgccggtgcggtcggcgtggagttcgccgacgtatttgccgccttcggcacgaag
gtcacgatggtcgaagtcgctcccacgattctccccatcgaagacgccgattgcagcgcg
gaactcgcgaaggcgttcaagaagcgcaagatcgacgtcctcaccggcgccaagatcacg
agcaccaaggtcacgaagacgggggccacgctggtcgtcgaagccggcggcaccacgcac
acgctggaagtcgagaaggtgctggtggcggccgggcgcgcgccgaacgtcgagaagatc
ggcctcgaggcggtgggcatcgccaagtcggaacgcggcttcgtgaaaatcaacccgaag
ttcgagaccaacgtgtcgggctactacgccatcggcgatgtggccggcaatcagatgctg
gcccataagggctcacgcgaagggcacgtgctggccgatctgctgggcggcgagcatccg
catctcgtgaactacaacaacatcccgagctgcacgtactgccatccggaagtcgccagc
atcggcctcaccgagcaggcgtgcaaggatcagaagctcgattacaaagtgggcaagttc
ccgttctcggcgaacggccgcgcacgcaccagcggagagactgacggcttcgtgaagatc
atccgtgacgcgaagtacggtgagatcctgggcgcacacatcgtgggcgcgcacgccacc
gagatcattcacgagctcgtggtcgcccgcgaaaacgagttcaccgtcgaagagatcgac
ctcgcggtccacgcccaccctacgctcagcgaagcgatcggcgaagcggtgctggattcg
ttggggaagatgctgcacgcgtaa

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