Gemmatimonas groenlandica: HKW67_11580
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Entry
HKW67_11580 CDS
T07783
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ggr
Gemmatimonas groenlandica
Pathway
ggr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ggr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HKW67_11580 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ggr03021
]
HKW67_11580 (rho)
03019 Messenger RNA biogenesis [BR:
ggr03019
]
HKW67_11580 (rho)
Transcription machinery [BR:
ggr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HKW67_11580 (rho)
Messenger RNA biogenesis [BR:
ggr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HKW67_11580 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
Spore_III_AA
S1CSD-TOTE-2
AAA_25
Fan1_SAP
MTS
AAA
Motif
Other DBs
NCBI-ProteinID:
QJR36101
UniProt:
A0A6M4IV88
LinkDB
All DBs
Position
2745109..2746362
Genome browser
AA seq
417 aa
AA seq
DB search
MHVAELKRKSVPELLALAASLHVTSTSGLRKQELIFRIEQALLDAETTLYGEGVLEVLPE
GYGFLRSQDFNYLHGPDDIYVSPSQVKRFDLRTGDTVMGEVRPPKEWERYLALLKVERIN
GGDPEQSKLRSAFDNLTAKYPDERIRLERSNGEVATRICDIIAPLGKGQRALIVAPPKGG
KTILMQQLANAIIENHPEITLIVLLIDERPEEVTDMQASCPKAEVICSTFDETADRHVQV
ADMVIEKAKRMVESGKDVVILLDSITRLARAHNAVAPQGGKIMSGGMEASAMQKPKAFFG
AARNLKEGGSLTIVATALIETNSRMDELIFEEFKGTGNMELVLDRKLADKRIFPAIDINK
SGTRREELLLTPFEQQRIFLLRAFLGDMPSDESLLFLIKRMERAQNNQEFFEQMAEA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgtagccgagctgaagcggaagtctgttcctgaactcctggcgctggccgcgtca
ttgcatgtcacgagtaccagcggccttcgcaagcaggagttgatcttccggatcgagcag
gctctgctcgatgccgaaacgacgctgtatggggaaggcgtccttgaagtgctcccggag
ggctacggctttctccggtcgcaggacttcaactatttgcacggcccggacgatatctac
gtctccccttcgcaggtgaagcgcttcgacctccgcaccggtgacacggtgatgggggaa
gtccgcccgccgaaggagtgggaacgctatctcgcgctcctcaaggtggagcgcatcaac
ggtggtgaccctgagcagtcgaaattgcgtagcgccttcgacaacctgaccgcgaagtat
cccgacgaacgcatccgcctcgagcggagcaacggcgaagtcgcaacccggatctgcgac
attatcgccccgctcgggaagggccagcgcgcccttatcgttgccccgcccaagggtggc
aagacgatcctcatgcagcagctcgcgaacgcgatcatcgagaatcatcccgagatcacg
ctcatcgtgctgctgatcgacgaacgcccggaagaagtgaccgacatgcaggccagctgt
cccaaggccgaggtcatctgctccacgttcgacgaaacggccgaccgccatgtacaggta
gccgacatggtcatcgagaaggccaagcgcatggtggagtcgggcaaggacgtcgtgatt
ctgctcgattccattacgcgactggcccgcgcccacaacgcggtggcgccgcagggcggc
aagatcatgtcgggtggcatggaggcctcggccatgcagaagcccaaggcgtttttcggt
gcggcccgcaatctcaaggaaggcggctcgctcacgatcgtcgccaccgcgctcatcgag
accaactcgcgtatggacgagctgatcttcgaggagttcaagggcaccggcaacatggag
ctcgtgctcgatcgcaagctggccgacaagcgcatcttcccggcgatcgacatcaacaag
tcgggcacccgtcgtgaagagctcttgctcacgcccttcgaacagcagcgcatcttcctg
ttgcgcgcgttcctgggcgacatgccgtccgacgagtcactgctgttcctgatcaagcga
atggaacgcgcgcagaacaaccaggaattcttcgaacagatggcggaagcctga
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