Gemmatimonas groenlandica: HKW67_11610
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Entry
HKW67_11610 CDS
T07783
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ggr
Gemmatimonas groenlandica
Pathway
ggr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ggr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HKW67_11610 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ggr03400
]
HKW67_11610 (mutM)
Enzymes [BR:
ggr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HKW67_11610 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HKW67_11610 (mutM)
DNA repair and recombination proteins [BR:
ggr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HKW67_11610 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
DUF7573
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QJR36106
UniProt:
A0A6M4IRQ3
LinkDB
All DBs
Position
complement(2751249..2752037)
Genome browser
AA seq
262 aa
AA seq
DB search
MPELPEVEFAAARLRTAVAGRVIARLDALHPSQQRHLPEEARRAAEGLTIDRVERRAKIQ
LVHLQGGALLEVHFRMTGDWEFTRVGEAPPRYERVRLETADGVRVSLVDSRAFSVVRLHA
AGAFVLPAIGPEPLTDDFTADGFRAALARRSGPIKPALLDQKLVAGVGNIYASEALWEAR
IHPATVANTLSRERVTRLRDAVRLVLETAPTERYYGRDDVNENEIWRVYGREGEPCRRCG
ATLKRLPQAGRSTFYCPRCQRR
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttgcccgaagtcgaattcgcagccgcgcgactccgcacggcggtcgccggt
cgcgtgatcgcccgcctcgacgccctgcacccctcccagcagcgccacctgccggaggag
gccagacgggccgccgaaggactcacgatcgaccgcgtggaacgccgggccaagatccag
ctggtgcatctgcagggcggggcccttctcgaggtccacttccggatgacgggcgactgg
gagttcacccgcgtgggcgaggcgcccccgcgctatgagcgggtccgcttggaaacagcc
gatggcgtgcgggtgtcgctggtggacagtcgagccttcagcgtggtgcgcctgcacgcc
gccggcgccttcgtgctgccggcgatcggcccggaacccctcaccgacgacttcacggcc
gacggctttcgcgccgcactcgcgcgacgcagtggcccaatcaagccggcgttactcgac
cagaaactggtggccggcgtgggcaacatctacgcatccgaagcgctgtgggaagcgcgc
attcatccggctaccgtcgccaacacgttgtcgcgcgaacgcgtgacgcgtctgcgcgat
gccgtgcgcctcgtgctcgagaccgcgcctacggagcgctactacgggcgcgacgatgtg
aacgagaacgagatctggcgcgtgtacggccgagagggcgaaccctgtcgtcgctgcggc
gcgacgctcaagcgattgccgcaagcgggacgcagcaccttctactgcccgcgctgtcag
cgacgctag
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