Gemmatimonas groenlandica: HKW67_12860
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Entry
HKW67_12860 CDS
T07783
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K21464
penicillin-binding protein 2D [EC:
2.4.99.28
3.4.16.4
]
Organism
ggr
Gemmatimonas groenlandica
Pathway
ggr00550
Peptidoglycan biosynthesis
ggr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ggr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HKW67_12860
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ggr01003
]
HKW67_12860
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ggr01011
]
HKW67_12860
Enzymes [BR:
ggr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
HKW67_12860
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HKW67_12860
Glycosyltransferases [BR:
ggr01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
HKW67_12860
Peptidoglycan biosynthesis and degradation proteins [BR:
ggr01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
HKW67_12860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PBP_1A_C
Motif
Other DBs
NCBI-ProteinID:
QJR36332
UniProt:
A0A6M4IU01
LinkDB
All DBs
Position
complement(3047947..3050313)
Genome browser
AA seq
788 aa
AA seq
DB search
MEAEANNTPTSAATAAALPAVSWRTRLVKPLLYAGALAVAGTLTTASWWWSCGWQGCPTP
AQLRAWKPTEGGALLARDSAFVSALSPVNRTNVPLSRVPAQVQAAFIAVEDRRFHAHHGV
DWYGVGRATVANLAAGSVREGASTITMQLARNVFLGNRATERTFGRKLLEWRYATLLEAS
LSKQDILERYLNAIYLGNGVYGVEGASRDLFGKSVANISLGEAAMLAGLPKAPSSYSPRR
DKSRALARRAVVFDVLLREGVADSATIQAVRSKPLKLSRAEWAPARAVDSWAVEAVRVTL
DSLRKAGVIPKALNDAQLRVWSTIDRRAQIAGERAIAAGAWQIDQERAYGGFAVSSAGSR
TQGALVALDPATGALRAIVGGRRIERKGFNRALRAKRQPGSTFKPFVYAEALRQGFTAAT
MLEDEPVEIDIGRTTWTPANYGDNYAGHITMRDALARSANAATVRLSSKLSVQRIADLAH
AQGIVSELPIVPALALGAGAVTPLELTAAYAPFGNGGTRVSPFLVERVEDQFGRVIWSHP
RTAGVKVLEVTDAFLITSLLQGVVDRGTGRPVRDAGIRGPVAGKTGTTNDGTDVWFVGYT
PTLVASVWFGADDPQPLGWNASGGRLAAPVWARFLRDGWHSPEEDSAWMQPGGIETKQID
IGTGKLASDWCGPSRREFFVRGSAPKESCENDPYLAMRDAEPPDWHDSTGGAPGEIDPAQ
IAEAVSGVLEAVGGNGKARAAADRIMVELRKAQREAAREARREAERMRREMQSAPQPPVP
PRPPRGRD
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgaagctaacaacacgccgacgtcggccgcgacagcagccgcgctaccggcc
gtgtcgtggcgcacacggctggtcaagcccctgctctatgctggggctctcgccgttgcg
ggtacgcttaccacggcatcgtggtggtggtcgtgtgggtggcaaggatgccccacgccc
gctcaactgcgcgcctggaagcccaccgagggtggtgccctgctggcacgcgacagcgcg
ttcgtgagtgcgctctcacccgtgaatcgtaccaacgttccactgagccgagtcccggcg
caggtgcaagcggccttcattgccgtcgaagatcggcgctttcacgcccatcatggtgtc
gactggtacggggtcggtcgcgcaacggttgccaatcttgccgccggcagcgtgcgcgaa
ggtgccagcaccatcacgatgcaactcgcccgcaacgtattcctcgggaaccgggccacc
gagcggaccttcggtcgcaagctcctcgaatggcgctatgccacgctgctcgaggcgtcg
ctctccaagcaagacatcctcgagcgctatctcaacgcgatctacctcggcaatggagtg
tacggcgtcgagggggcaagccgcgatctcttcgggaagtcggtcgccaatatctcgctc
ggcgaagccgcgatgctggccggtctgcccaaggcgccatcgtcgtactcgccgcgccgc
gacaaatcgcgcgcgctggcgcgtcgcgccgtcgtgttcgatgtactgctgcgcgagggc
gtggccgacagcgccaccattcaggccgtgcgcagcaagccgctcaagctctcgcgtgcg
gaatgggcgccggcacgggcggtcgattcgtgggccgtcgaagcggtgcgcgtcaccctc
gactcgttgcgcaaagccggtgtgatccccaaggcgctcaacgatgcgcaactgcgcgtg
tggagcacgatcgaccgacgtgcgcagatagccggcgaacgcgcgattgcggcgggtgcg
tggcaaatcgaccaggagcgcgcctacggcggcttcgccgtgagcagcgccggttcgcgc
acgcaaggcgctttggtcgctctcgatcccgcgaccggcgccttgcgtgcgatcgtcggt
ggccgacgcatcgagcgcaagggcttcaatcgcgccctacgcgccaagcggcagccgggc
agcacgttcaagccgttcgtgtacgccgaagcgctgcgtcagggcttcaccgccgccacc
atgctcgaagacgaaccggtcgagatcgacatcggtcgtaccacatggacgcccgccaac
tacggtgacaactacgcgggacacattacgatgcgtgacgcgctggcgcgttcagcgaac
gccgccaccgtacgcctgagcagcaagttgagtgtgcagcgcattgcggatctcgcgcat
gcgcaaggcattgtgagcgaactgcctatcgtgcccgcgctcgcgctcggcgccggggct
gtgacaccgctcgaactcaccgccgcgtatgcgccattcggcaacggcggtacgcgcgtg
agtccatttctcgtggagcgcgtcgaagatcagttcggacgtgtgatctggagtcatccg
cgcacggccggcgtcaaggtgctcgaagtaaccgacgcgtttctcatcacgtcgctgctg
cagggcgtcgtcgatcgcggcaccggtcgtccggtgcgtgacgccggcattcgtgggccg
gtcgcgggcaagaccggcaccaccaacgacggcaccgacgtctggttcgtcggatacacg
cccaccctggtggcgagtgtgtggttcggcgccgatgacccgcagccactgggctggaac
gcctcgggtggtcgtctggccgcgccggtgtgggcgcgcttcctgcgcgacggctggcac
agcccggaggaagacagcgcgtggatgcagccgggcggtatcgagacgaagcagatcgac
atcggcaccggcaagctggccagcgattggtgcggcccatcgcgtcgcgagttcttcgtg
cgcggcagcgcgcccaaggaatcgtgcgagaacgatccctatctcgccatgcgtgatgcc
gagccgcctgactggcatgacagcacgggtggagcgccgggggagatcgatccggcgcag
atcgctgaggccgtgagcggcgtgctcgaagcggtaggcggcaacggtaaggcacgcgcg
gccgccgaccgcatcatggtggagttgcgcaaggcacagcgcgaagcggcgcgcgaggcg
cgacgtgaagcggagcggatgcggcgtgagatgcagtccgctccgcaaccgccagtgccg
ccgcgcccaccccgcgggcgcgactga
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