Gemmatimonas groenlandica: HKW67_15860
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Entry
HKW67_15860 CDS
T07783
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ggr
Gemmatimonas groenlandica
Pathway
ggr03030
DNA replication
ggr03430
Mismatch repair
ggr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ggr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HKW67_15860 (holA)
03430 Mismatch repair
HKW67_15860 (holA)
03440 Homologous recombination
HKW67_15860 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ggr03032
]
HKW67_15860 (holA)
03400 DNA repair and recombination proteins [BR:
ggr03400
]
HKW67_15860 (holA)
Enzymes [BR:
ggr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HKW67_15860 (holA)
DNA replication proteins [BR:
ggr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HKW67_15860 (holA)
DNA repair and recombination proteins [BR:
ggr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HKW67_15860 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
QJR36884
UniProt:
A0A6M4IPN0
LinkDB
All DBs
Position
3716239..3717333
Genome browser
AA seq
364 aa
AA seq
DB search
MAKESSPLRVVQAAIQSRSFAPVYYLHGDDDYLKDAAVRDLLDASIDPSTRDFNCEIRRA
SELDAEAVSSLLSTPPMLAEKRAVVFRDVTALKKAARQQLDKYLKRPAGDTLLLLVSPAG
TKADTALAAASESLEFAPLTPERVRRWITHHATTALAVHIADDAAQLLQQAVGNDLHQLA
SELDKCASYALGARELPTGDADVRATIDIDIVSAVVGIRRGETVTDLLDAVARQDAAAAV
TLVAHVLGQPKVTAVQVVMMLSTQAFALAYGRARRDAGIPTNRLPQEFFAFLKETGGYPG
RPWGEAASAWTKVTEQWSAVSCEKALELLLEADMALKDTTVSNAEQILMSLVLSLCAMRR
RKAA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggaatcgtcgcccctccgcgtcgtgcaagctgcgattcagtcgcggagcttc
gcgcctgtgtactacttgcacggcgacgacgattacctgaaggatgccgccgtgcgcgac
ctgctcgacgcgtcgatcgacccgagcacacgcgacttcaactgcgaaatccgtcgcgcc
agcgagctcgatgccgaagcggtgagcagcctgctttcgacgccgccgatgctcgccgag
aaacgcgccgtggtcttccgcgatgtgacggcgctcaagaaagccgcgcgacagcagctc
gacaaatatctgaagcgacccgccggcgacacgttgctgttgctggtgagtccggccggt
acgaaggccgatacggcgctcgcggcggcgtcggagtcgctcgagtttgcgccgctcacg
ccagagcgcgtgcgccggtggatcacgcaccatgcgaccaccgcgctggcggtccacatt
gccgacgatgccgcacagctgctgcagcaggcggtgggcaacgatctccatcaactcgcg
tcggagctcgacaagtgcgccagttacgcactcggggcgcgagagctaccgacgggtgac
gccgacgttcgtgcgaccatcgatatcgacatcgtctcggccgtggtcggcatccgtcgc
ggcgaaacggtgacggatctgctcgacgccgtcgcccgacaggatgccgcggccgcggtg
acgctggtggcgcacgtgctggggcagccgaaagtcacagcggtgcaagtcgtgatgatg
ctgagcacgcaggcgttcgcactggcttatggtcgggcgcgacgcgatgcgggcattccg
accaaccggttgccgcaggagttcttcgcgttcctcaaggagaccggcggatatcctggt
cggccatggggggaagcggcatcggcctggacgaaggtgacggagcaatggagtgcggta
tcgtgcgagaaggcgctcgagctgttgctggaagccgatatggcgctcaaggacacgacg
gtctcgaacgcggagcagatcctgatgtcactcgtgctgagtctctgtgccatgcgtcgc
cggaaggccgcatga
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