Gemmatimonas groenlandica: HKW67_16265
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Entry
HKW67_16265 CDS
T07783
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
ggr
Gemmatimonas groenlandica
Brite
KEGG Orthology (KO) [BR:
ggr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ggr03400
]
HKW67_16265
Enzymes [BR:
ggr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
HKW67_16265
DNA repair and recombination proteins [BR:
ggr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
HKW67_16265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QJR36961
UniProt:
A0A6M4IXN9
LinkDB
All DBs
Position
complement(3817519..3819117)
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AA seq
532 aa
AA seq
DB search
MPTTLAFVAPWESSRAVANIPREPRDDVVVLLLESVAKGSSLPWHRQKLVLLLSSMQHFA
AALEAAGYRVAYRKATSYAEGIAAAAAEFSAAKVVATEGREQDMVDELDRARTLLDADGR
SLTLREDRGFLATREEFATWARGRKEHRMEFFYREMRRKHGILMESDGTPSGGQWNFDAD
NRKPWPKGRAAPEVWRVEPDDITRAQMDRVRTWRNRWGSVETFALPVTRPDAKAWLDRFI
AERLPEFGPYEDALVHGAPDLLHSTLSSIINVGLLHPLECVRKAEAAWRAGLVPIASAEG
FIRQILGWREYIRGMYWHLMPGLRTANALNATRELPRWFWAPDGEAYDESQATSAACEMR
CLADTIRQVRDYGRVHHIARLMVQCNIATLIGVEPAALSRWYWSAFTDAYEWVELPNVVG
MGTWGDGGALASKPYVASGAYINRMSNYCGSCRYDVKQRSGPDACPVNVLYWDFLASHQA
RFGTHPRMRMMFVHVKNIAEPELVQIRAQAAAFRDALDYDSAFAPPAVVATA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccaccctcgccttcgtcgccccatgggaatcctcgcgcgccgtcgcgaatatc
ccgcgtgaaccccgcgacgatgtcgtcgtgttgttgctcgaatcggtcgccaagggctcc
tcgctgccctggcatcgacagaagctcgtcctgctgctgtcgtccatgcagcactttgcc
gcggccctcgaagcggccggctatcgtgtcgcctaccggaaagcgaccagctacgccgaa
ggcatcgccgccgccgccgccgagttcagtgcagccaaagtcgtcgccaccgaaggccgc
gagcaggatatggtcgacgagctcgatcgcgcccgcaccctcctcgacgccgacggccgc
agcctgaccctccgtgaagaccgcggctttctcgccacgcgtgaggaattcgcgacctgg
gcccgcgggcgcaaagagcaccggatggagttcttctaccgggagatgcgccggaaacac
ggcattctgatggagtccgacggcacgccgagcggcggacagtggaatttcgacgccgac
aaccggaagccgtggcccaaaggtcgcgccgcccccgaggtctggcgcgtcgagcccgac
gacatcacgcgggcgcagatggaccgcgtgcgtacgtggcggaatcgctggggcagcgtg
gagacgttcgcactgcccgttacccgtcccgatgccaaggcgtggctcgatcggttcatt
gccgaacgactgccggaattcggtccgtacgaagacgcgctcgtgcacggggcgccagat
ctgctgcactccacgctgtcgtcgattatcaacgtcgggttgctgcatccgctcgaatgc
gtgcgcaaagccgaagccgcgtggcgtgcagggctcgtccccatcgcctcggccgaaggc
ttcatccggcagatcctgggttggcgcgagtacatccgcggcatgtactggcacctgatg
ccggggctccgcaccgcgaacgcgctcaacgccacgcgcgagctgccgcgctggttctgg
gcaccggatggcgaagcgtacgacgaatcacaggccacgagcgcggcctgcgagatgcgt
tgcctcgccgacaccatccgacaggtgcgcgactacgggcgcgtgcatcatatcgcgcgg
ctcatggtgcagtgcaacatcgccaccctgatcggcgtggagccggcggcgctctcgcgc
tggtactggagcgccttcaccgacgcgtacgagtgggtggagctgcccaacgtggtgggc
atgggcacgtggggcgacggcggcgcgctcgcctccaagccatacgtggcgtcgggcgcg
tacatcaaccgcatgagtaactactgcggcagctgtcgctacgacgtgaagcagcgctcg
ggtcctgatgcctgtccggtaaatgtgttgtactgggacttcctcgcgtcgcaccaggcg
cgcttcggcacgcatccacgcatgcgtatgatgttcgtgcacgtgaagaacatcgccgaa
ccggaactggtgcagatccgcgcgcaggccgcggcgtttcgcgacgcgctcgactacgac
agcgccttcgcgccacccgccgtcgtcgccaccgcgtaa
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