Gemmatimonas groenlandica: HKW67_17840
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Entry
HKW67_17840 CDS
T07783
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
ggr
Gemmatimonas groenlandica
Pathway
ggr00630
Glyoxylate and dicarboxylate metabolism
ggr00680
Methane metabolism
ggr01100
Metabolic pathways
ggr01120
Microbial metabolism in diverse environments
ggr01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ggr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HKW67_17840 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
HKW67_17840 (fdhF)
Enzymes [BR:
ggr01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
HKW67_17840 (fdhF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4_Nqo3
Fer4
Fer4_10
Fer4_9
Fer4_18
Fer4_21
Fer4_6
Fer4_17
Fer4_2
Fer4_8
Fer4_NDSU1
Fer4_4
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
QJR37245
UniProt:
A0A6M4ISS6
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All DBs
Position
complement(4167807..4170539)
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AA seq
910 aa
AA seq
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MSTTTTTMVYLTIDGIPVTAPAGTSVMRAARDAGIAIAKLCATDSLQAFGSCRLCVVDIF
GRRGLPASCTTPVEEGMVVRTQTEKVARVRRNVMELYISDHPLDCLTCAANGDCELQDMA
GAVGLREVRYGMDGANHLQAEKDESNPYFTFDPAKCIVCSRCVRACDEIQGTFALSITDR
GFGSKVSAGMNESFLASECVSCGACVQACPTATLTEKSVIAAGQPDRTVKTTCAYCGVGC
SFNAEMKGNDVVRMVPDMSGGANEGHSCVKGRFAWGYASHRDRVLAPMVREHITDEWREV
SWDEAIVHAAERFRAIQDQHGRGAIGGISSSRCTNEEVYVVQKMVRAAFGNNNIDTCARV
CHSPTGYGLKQTFGTSAGTQDFKSVAHADVIVVIGANPTDAHPVFASRMKRRLRQGAKLI
VIDPRRIDLVRSPHIQAAFHLPLRPGTNVAVVNAMAHVIVTEGLVNEAFVAERCDTKSFA
QWRDFIALPEHSPEATEAFSGVPADDVRRAARLYATADNSAIYYGLGVTEHSQGSTMVMG
IANLAMAAGHIGREGTGVNPLRGQNNVQGACDMGSFPHELPGYRHIGDDAIRAQFEQAWH
VALDAEPGLRIPNMLASATAGQFHGLFIHGEDIAQSDPDTKHVTDALRAMELVVVQDLFL
NETAKYAHVFFPGTAFLEKDGTFTNAERRINRVRPVMPPRTGLSEWEIVCRLATAMGYPM
EYRNAAEIMDEIASLTPTFAGVSFAHLDRVGSVQWPCTERTPLGTRIMHQDGFVRGKGRF
LITEYVPTDEKSTRRFPLLLTTGRILSQYNVGTATRRTANTVWHPEDVLEMHPHDAEVRG
IGEGDSVYIASRKGAITLHATVTDRVPPGIVYTTFHHPDSAANVITTEYSDWATNCPEYK
VTAVEVRPGD
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgaccacgacgaccatggtgtacctcaccatcgatggcatcccggtcacagca
cccgccggtacgtccgtcatgcgcgccgcgcgcgacgccggcatagcgattgccaagctc
tgtgccaccgactcgctgcaagcgttcggctcatgccggctgtgcgtggtcgacatcttc
ggccgcaggggacttccggcctcatgtacgacgccggtcgaggagggaatggtcgtccgc
acacagaccgagaaagtcgcgcgcgtgcgccgcaacgtgatggagctctacatctccgac
catccgctcgattgcctgacctgcgcggcgaacggcgactgcgagctgcaggatatggcc
ggcgccgtcgggctgcgtgaggtgcgctatggcatggacggggcgaatcacctgcaggcc
gagaaggacgagtcgaacccgtacttcaccttcgatcccgccaagtgcatcgtctgttca
cgttgcgtgcgagcctgcgacgagattcagggcacgttcgcgctgagcatcaccgatcgc
ggattcggctcgaaggtcagcgccggtatgaacgagtcgttcctggcgtcggagtgcgtg
tcgtgcggcgcctgcgtgcaggcctgccccacggccacgctcacggagaagagcgtcatc
gccgccggccagcccgatcgcacggtaaaaaccacctgcgcgtactgcggcgtgggctgc
tcgttcaatgccgagatgaagggcaacgatgtggtgcgcatggtacccgacatgagtggc
ggcgccaacgaagggcactcctgcgtgaagggacgctttgcgtggggctacgccagccat
cgcgaccgcgtactcgcgccgatggtgcgtgagcacattaccgacgaatggcgtgaggtg
agctgggacgaggccatcgtgcatgcggccgaacggttccgcgcgattcaggaccagcac
ggacgcggcgctatcggcggcatctcgtcgtcacgatgcaccaacgaagaagtgtacgtg
gtgcagaagatggtgcgcgccgccttcggcaacaacaacatcgatacctgcgcgcgtgta
tgtcattcgcctaccggatacggtctcaagcagacgttcggcacgtcggcgggcacgcag
gatttcaagtcggtggcacacgccgatgtgatcgtggtgatcggcgccaatcccaccgac
gcgcatccggtgtttgcctcgcgtatgaaacgccggctgcggcagggcgcgaagctcatc
gtgatcgatccgcgccgcatcgatctggtgcgcagcccgcacattcaggcggcgtttcac
ctgccgctcaggccgggcaccaacgtcgccgtggtcaacgcgatggcgcatgtgatcgtc
accgaagggttggtgaacgaggcctttgtcgcggagcgatgcgacacgaagtcgttcgcg
cagtggcgcgacttcattgcgctccccgagcattcgcccgaagccaccgaggcattcagc
ggcgtacccgccgacgacgtgcgacgcgccgcgcgcctgtacgctaccgctgacaattcg
gcgatctactacgggctgggcgtcaccgaacacagtcaaggcagtacgatggtcatgggc
attgccaacctggccatggcggcggggcacatcggacgcgaggggacgggtgtgaacccg
ctacgtggccagaacaacgtgcagggcgcctgcgacatggggtcgttcccgcacgagtta
ccgggctaccggcacattggcgacgacgccattcgcgcgcagttcgagcaggcgtggcat
gtggccctcgacgccgagccagggctgcgtattccgaacatgctcgcctcggccacagcc
ggtcagtttcacggcctcttcattcacggcgaggacattgcgcagtccgatcccgatacg
aagcacgtgactgacgccctccgcgcgatggagctggtggtcgtgcaggatctgtttctg
aacgagaccgcgaagtacgcgcacgtgttcttcccgggcacggccttcctcgaaaaggac
ggcacgttcacgaacgctgagcgccgcatcaatcgggtgcgaccggtcatgccgccgcgc
acggggctgtcggaatgggagatcgtgtgccgactcgccacggccatgggatatcccatg
gagtatcgcaatgcggccgagatcatggatgagatcgcgtcgctcacaccgacgttcgcc
ggcgtgtcgttcgcgcatctcgatcgtgtgggcagcgtgcagtggccctgcacggagcgc
accccactcggcacgcgcatcatgcaccaagacggattcgtgcggggcaaggggcgcttc
ctgattaccgagtacgtgccgaccgacgagaagtcgacgcgtcgttttccgctgctactc
acgactggacgtattctgtcgcagtacaacgtcggcaccgcgacccgacgcacggcgaat
accgtgtggcatcccgaagacgtgctcgagatgcatccgcacgatgccgaagtgcgcggg
atcggcgagggggacagcgtgtacatcgcgagccgcaagggggccatcacgttgcacgcc
acggtgacggatcgcgtgccgccagggatcgtgtataccaccttccatcatcccgattcc
gccgccaacgtgatcacgacggagtattcggactgggccaccaactgcccggagtacaag
gtgaccgccgtcgaggttcggcccggtgactga
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