Gemmatimonas groenlandica: HKW67_18700
Help
Entry
HKW67_18700 CDS
T07783
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ggr
Gemmatimonas groenlandica
Pathway
ggr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ggr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HKW67_18700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ggr03400
]
HKW67_18700
Enzymes [BR:
ggr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HKW67_18700
DNA repair and recombination proteins [BR:
ggr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HKW67_18700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QJR37392
UniProt:
A0A6M4IWX0
LinkDB
All DBs
Position
4366029..4369250
Genome browser
AA seq
1073 aa
AA seq
DB search
MNVYIAPRLGVLRDHLIARLQAAPLPPRDTEIIVVQSQGMRQWLTLAMADALGCAGSVEL
PFPARFVRSLAASVGMSERDVDPFSRESMTWRVDDLLRDVDPGDQRYTALSRYLGDGDDR
MRFGLAAQVAARFDDYQLFRHDLLEAWERGEHPLNSPHERWQAALWRALCANGAEHGARR
LTRLLAHIHAAPPGSLSLPARVSVFGVSSLPPRIIELLAAIARHTEVTVYAALLPDHAAS
AETTPHPLAKAFGSQGQVLQRLLVAQGATVTALHDESASGSATLLALLQQEMASAGDRRA
NGSSELTLSADDTSLRVHAAHGKLRELEIIRDQIGHAFVTDRTLRPHDVLLLVPDISDWA
PLVQSVFGANDGSVTLPFTVADRRRRDESVAAAVLRLLSLEGGRLTHSEVFGVLEQPAIH
TAAGLDDGQVEYLAQITREANVRWGYDDEALARLALPAADMPTWRTGLDRLLLGQMAGAF
PELVLGVLPQAGDTVGDPAAIAALSQWIDMLAVTLQSWRQSRSIADWSAALSEFLDLVVQ
PTSADEREGLNTVRLVMQALSTTAEQTGYTALVPFSVVRDWLEQELADDSFGSGFLSGRL
TVAALKPMRSVPFKVIAVAGLDDAAFPRRDRRPAFDLLSCEARDGDRNLRDDDRQLFLDL
LMAAESRVVLTYSGNDPRDNAARAPSIVVDELLDHLDRRTNGSARAKLVLRHPLQAFSDR
YVSTDDPRLISFSPLAGKASVPADADGFPFFVDTVPDLVNDDVAEISLRNLTSFWSNPSQ
WFCEQVLRLRLPDAGATDSPDSELHWLNKLKQGGVRADILRSVMTGRRDVEWMQRQLVAV
GKLPPGALGASWFTRLENEARPVIDALPEGARTSAALTVLGTDWCITGAVEGVIENARYV
VRTGSVSARHRIVAWVEHVVMCAARQQGAEVPGTTVLTYPDSKKEKAIVESMIEVPNATD
VLDGWISAMHDARRAPLPFFPNAAEAYRASMVHNAKIALNPKSRAKAQLPIKKAVAAFRG
NDFGAPGDESDPYLQLCFRDTLAFDASDAEFVRLTTMLFEPSWSPHMVAGAGL
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgtatatcgccccgcgactgggcgtgctgcgcgaccatctgatcgcgcgactg
caggcggcgcctcttccgccgcgcgacacggaaatcatcgtggtgcaaagtcagggtatg
cggcaatggctcacgcttgcgatggccgacgcgctgggctgtgcgggttcggtggaactg
ccgttccccgcgcgcttcgtacgctcgctggccgcctccgtggggatgtcggagcgcgac
gtcgatcccttctcgcgcgagtcgatgacctggcgggtggatgacctgctgcgtgacgtg
gatccgggtgaccagcgctatacggcattgtcccgctatctcggcgacggtgacgaccgg
atgcgcttcggactcgccgctcaagtcgccgcgcggttcgacgactatcagctgtttcgg
catgatctgctcgaggcgtgggagcgcggcgagcacccgctcaactcgccgcatgagcgc
tggcaggcggcgctttggcgtgcattgtgcgcgaatggcgcggaacacggggcgcgccgg
ctcacgcgactgttggcgcatatccatgcggccccgccgggttcactgtcgttgccggct
cgggtctccgtgttcggcgtgagctcgctgccgcctcgcatcatcgaactgctggcagcg
atcgcgcggcacaccgaggtcacggtgtatgccgcgctgctgcccgatcatgcggcgtcg
gcggagacgacaccgcatccgctggccaaggcattcggcagtcaagggcaagttctgcag
cgcctactggtggcgcagggcgctacggtgacggcactgcacgacgagtcggccagcggc
tcggctacgctgctcgcgctactgcaacaggaaatggcgagtgcgggcgatcgtcgcgcg
aatggctcgagcgagctgacgctttcggccgacgacacttcgctgcgcgtgcacgcggcg
cacgggaagctgcgcgagctcgagatcattcgcgatcagatcggccacgcattcgtgacc
gatcgcacgctcaggccgcacgacgtgctgctgctggtgccggacatcagcgactgggcc
cccctcgtgcagtcggtattcggcgcgaacgacggatcggtgacccttccgttcaccgtg
gccgatcgccgccgtcgcgacgaatcggtggccgccgcggtgctgcggctgctctcgctc
gagggcggtcgcctcacgcattccgaagtgttcggcgtgctggaacagccggcgatacac
accgcagccggcctcgacgacgggcaggtggagtatctcgcgcagatcacgcgcgaggcc
aacgtgcgctgggggtacgacgacgaggcactggcgcgtctcgcgctgccggcagccgac
atgccgacatggcgcaccggactcgatcggttgctgctggggcagatggccggtgcgttt
ccggaactcgtgctgggcgtgctgccgcaagccggcgacacggtgggcgatcccgcagcg
atcgcggcgctgtcgcagtggatcgatatgctcgcggtgacgctgcagtcctggcgacag
tcgcgatcgatcgccgactggtcggccgccttgtcggaattcctcgacctcgtcgtgcag
cccacgtcggccgacgagcgcgaggggctgaacacggtacgcctggtgatgcaggccctc
tccaccacggccgagcagacggggtacaccgcgctcgtcccgttcagcgtggtgcgcgac
tggctcgagcaggagctcgccgacgacagctttggctccggctttctcagcggccgactc
acggtggccgcgctcaaaccaatgcgcagcgtgccgttcaaggtgatcgccgtggccggc
ctcgacgacgcggcattcccgcgacgcgaccgtcgcccggcgttcgacttgctgtcgtgc
gaagcgcgcgacggtgatcgcaatctgcgcgacgatgaccgccagctctttctcgatctg
ctgatggcggccgagtcgcgcgtggtgctcacctacagtggaaacgacccccgcgacaac
gcggcgcgggcgccatcgatcgtggtcgacgagttgctcgaccatctcgatcgacgcacc
aatggaagcgcacgggccaagctcgtgctgcggcatccgctgcaggcgttcagcgatcgc
tatgtcagcaccgacgacccacgtttgatctcgttctcaccgttggcaggcaaggcgtcg
gtcccggcggatgctgatggctttccgttcttcgtggacacggtgcccgatctcgtgaat
gatgacgtggccgagatctcgctgcgcaacctgaccagcttctggagtaatccgtcgcag
tggttctgcgaacaggtgttgcgtctgcgtcttcccgacgccggtgcgaccgacagcccg
gacagtgagctacactggctcaacaagttgaagcagggcggtgtgcgcgccgacattctg
cggtcggtaatgactggccgtcgagatgtggagtggatgcagcgtcagctggtggcggtc
ggcaagctgccacccggcgccctcggcgcgtcgtggttcacgcgcctggagaacgaagcg
cgaccggtgatcgacgcgctgcccgagggtgcccgcaccagcgccgcgctcacggtactc
ggcaccgactggtgtatcaccggtgcggtggagggcgtgatcgagaacgcccgctacgtc
gtgcgcacggggagcgtgtcggcacggcaccggatcgtggcgtgggtggagcacgtcgtg
atgtgtgcggcgaggcagcagggggctgaggtaccgggtaccacggtactcacgtatccc
gacagcaagaaggagaaggcgatcgtcgagtcgatgatcgaagtgccgaacgctaccgac
gtattggacggctggatcagtgccatgcacgacgcgaggcgggctccgttgccgttcttt
ccgaatgcggccgaggcgtatcgggcatccatggtgcacaacgccaagatcgcgctcaat
ccgaagtcgcgcgccaaggcgcagctccccatcaagaaggccgtggccgcgttcagggga
aacgacttcggtgcccccggcgacgagtcggatccgtatctgcagttgtgcttccgggac
acactggcgtttgatgcgtccgacgcggagttcgtgcgcctcacgaccatgctgttcgaa
ccatcgtggtcgccgcacatggtggcgggggccggcctatga
DBGET
integrated database retrieval system
