Gemella haemolysans: NCTC10459_00410
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Entry
NCTC10459_00410 CDS
T06551
Name
(GenBank) Probable DEAD-box ATP-dependent RNA helicase SA1885
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gha
Gemella haemolysans
Pathway
gha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10459_00410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gha03019
]
NCTC10459_00410
03009 Ribosome biogenesis [BR:
gha03009
]
NCTC10459_00410
Enzymes [BR:
gha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC10459_00410
Messenger RNA biogenesis [BR:
gha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC10459_00410
Ribosome biogenesis [BR:
gha03009
]
Prokaryotic type
rRNA helicases
NCTC10459_00410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Flavi_DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
VEI38177
LinkDB
All DBs
Position
1:459522..460982
Genome browser
AA seq
486 aa
AA seq
DB search
MTTFEELGVSQETVQSLTNMNFISPTGIQTETIPYVLSGVDILAQAQTGSGKTGAFGIPL
VDTVRRNDQLQSLILAPTRELAQQVGEQLRLMSRAKGLKVSIVFGGTSIERQIQDLKKRP
QIIVGTPGRVIDHINRRTIKLETLTHLVLDEADEMLNMGFIEDVRFILSKITSRHQTLLF
SATMPKTIMELSKEFMKDYKLIKTMSDEDLKPDITEYATIARENEKLETLVGFLDVQNPN
LAIVFGRTKRRVDELASALIAKGYLAEGLHGDITQSKRLEILRKFKNNSLQILAATDVAA
RGIDISDVTHVYNFDIPQDVESYTHRIGRTGRAGKSGVAITFLNPVEMPYLKDIENSRGE
RMKMLRPYSLDEVKKSRHNRLFDEVVLEMDNNHVEFNSLANKLLAETNAEKVITILLSKL
INDKKEVDVELSFEKPLPRRQDKGRRSNRGNDRRRRSDNRDKKNRNERRGTDKKFFDKKG
RRMQNK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatttgaagaattaggggttagtcaggaaactgttcaatcactaaccaatatg
aatttcatatctccaactggtattcaaacagaaacaattccatatgtattatctggagtt
gacatattagcccaagcacaaacaggatcgggaaaaacaggtgcttttggaataccgtta
gtagatacagtaaggcgaaatgatcaattacaatcattaattcttgccccaacaagagaa
ctagctcaacaagtaggagaacaacttcgacttatgtcaagagcaaaaggattaaaagtt
agcatcgtatttggtggaacaagtattgaaagacaaattcaagatttgaaaaaacgtcca
caaattatagtgggaacaccaggacgtgtaatcgatcacattaatagaagaacgataaaa
ttagaaacattaacacatttagtattggatgaagcagatgaaatgctaaatatgggattc
atcgaagatgttagatttattttatcaaagataacttcaagacatcaaacactattattc
tcagcaactatgccgaaaacaataatggaactctctaaagaatttatgaaagactataaa
cttattaaaacgatgagtgatgaagatcttaaaccggatattacagagtatgctacaatt
gctagagagaatgaaaaattagaaactttagttggatttttagatgttcaaaatccaaac
ttagctattgtgtttggaagaactaaacgtcgtgttgatgaattagcgagtgctttaatt
gccaaaggatacttagcagaaggactacacggagacattactcaatctaaacgtttagaa
attttacgtaaatttaaaaataactcattgcaaattcttgctgctacggatgtagcagcg
cgaggtattgatattagcgatgttacccatgtctataattttgatattcctcaagatgta
gaaagttatactcatagaattggtagaacaggtagagcaggtaaatcaggagttgcaata
acattcttaaatccagtagaaatgccatacttaaaagacattgaaaattctcgtggagag
agaatgaaaatgttacgtccatattcattagatgaagtgaaaaaatcacgccataataga
ttgtttgatgaagttgttttggaaatggataataatcatgtagagtttaatagtctagca
aataaactgctagctgaaactaatgcagagaaagttatcactatattattaagtaaatta
ataaatgataaaaaagaagttgatgtagaattatcatttgaaaaacctcttccgagaaga
caagataagggaagacgttcaaatagaggaaatgacagacgtcgtcgttctgataataga
gataagaaaaatcgtaatgaacgtcgtggtacagataaaaaattctttgataaaaaaggt
cgtagaatgcagaataaataa
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