Gemella haemolysans: NCTC10459_00639
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Entry
NCTC10459_00639 CDS
T06551
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gha
Gemella haemolysans
Brite
KEGG Orthology (KO) [BR:
gha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gha03032
]
NCTC10459_00639 (topA)
03400 DNA repair and recombination proteins [BR:
gha03400
]
NCTC10459_00639 (topA)
Enzymes [BR:
gha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC10459_00639 (topA)
DNA replication proteins [BR:
gha03032
]
Prokaryotic type
DNA Topoisomerases
NCTC10459_00639 (topA)
DNA repair and recombination proteins [BR:
gha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC10459_00639 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Auto_anti-p27
Zn_ribbon_RPB9
Toprim_4
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
VEI38403
LinkDB
All DBs
Position
1:706242..708293
Genome browser
AA seq
683 aa
AA seq
DB search
MAENLVIVESPSKAKTIEKYLGKKYRVISSKGHVRDLPKSRMGVEVLDNGNVDVDYISIR
GKGDVIKSLKKEAKGKNVFLASDPDREGEAIAWHIAHILGLDNNSDNRIVFNEITKDAVK
DAIKHPRKINTDLVQSQQARRILDRLVGYNISPVLWKKVKPKLSAGRVQNAALKLIVDRE
EEIQKFVPQEYWSMPIDFIKNRKVLTANFYSYKGEKLKLESKKDVDKIRKAIKGEVFKVI
DVVKTNKNRNAPNVYITSTMQQDASRKINFKTRKTMSVAQELYEGINLKKLGGVTGLITY
MRTDSTRVSDEAVKMARDYILNNFGKEYLASTVKARKSSKNVQDAHEGIRPTNVNFTPDS
IKEYLSNDQYKLYKLIWERFLASRMSAAVHETSTTTFENNKVIYRGAHSKLLFNGFLSVL
KEKEKVKLAPEFEIGEDAKIKEIKEEQHFTQPPARYSEAKLIAELEELGVGRPSTYATIV
DTLQKRYYVKLQNKVFTPTELGTLVSKITEQYFPDIINTKFTANLESQLDDIAEGKVGWE
KTIFNFYSNFRKDVEKAETEMEKVEIKQEFTGESCPECSSPLVFKLGKFGKFIACSNFPD
CRYTNTIQKKVGVVCPKCKKHEILEKKSKKGKLFYGCEGFPECDFVSWDKPINRSCPKCE
NILYEGKKGVLCGHCDYKEEIKK
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatttagtaatagtcgaatctccttctaaggcaaaaactattgaaaaatat
ctagggaaaaaatatagagtaatatcttcaaaaggtcatgtaagagatcttccaaaaagt
agaatgggagtagaggtactagataatggaaatgtagatgtggattacatttctataaga
gggaagggcgatgtaattaagtctttaaaaaaagaagccaaaggaaagaatgtattccta
gcatccgatcccgatagagaaggagaggcaatagcttggcatattgcacatattttagga
ttagataataattctgataacagaattgtttttaatgaaataacaaaagatgcggtaaaa
gatgcgataaaacatccacgtaagataaatactgatttagttcagtcacaacaagctaga
agaatattagatcgtttagttggatataatatttctcctgtactttggaaaaaagtaaaa
ccaaagctatcagcaggaagagtgcaaaatgcagctctaaaactaattgttgatagggaa
gaagaaattcaaaaatttgttccacaagaatattggtctatgccaattgattttataaaa
aatagaaaagtcttaacagctaatttctattcttataaaggtgaaaaacttaaacttgaa
agtaaaaaagatgtagataaaataagaaaagcgataaaaggtgaggtatttaaagttatc
gatgtagtgaaaactaataaaaatcgtaatgcacctaatgtttatattacgtctacaatg
caacaagatgcttcaagaaagattaactttaaaacacgtaagactatgagtgtcgctcaa
gaattgtatgaaggtattaaccttaaaaagttaggtggagttaccggtttaattacatat
atgagaacggattcgacaagggtttctgatgaagctgttaaaatggctagagattatata
ctaaacaattttggtaaagaatatctagcatcaacagttaaagctagaaaatcaagcaag
aatgttcaagatgctcatgaaggaatcagacctacaaatgttaatttcacacctgatagt
attaaagaatacttatcaaatgaccaatataagttatataaacttatatgggaaagattc
ttagctagtcgtatgagtgctgcagttcatgaaacaagtacaacaacgtttgaaaataat
aaagttatctatagaggagcgcattctaagttactgtttaatggattcttatctgtattg
aaagaaaaagaaaaagtaaaacttgcaccagaatttgaaattggagaagatgctaaaata
aaagaaataaaagaagaacagcattttactcaaccacctgcacgctactctgaagctaaa
cttatagctgaacttgaagaattaggagtaggacgcccttcaacatatgctacaattgtt
gacaccttacaaaagagatactatgtaaaattacaaaataaagtgtttacaccaactgaa
ttaggaacattagttagtaaaataactgaacaatatttccctgatattataaatactaag
tttacagctaatcttgagagtcaattagatgatatagcagagggtaaagtaggttgggaa
aaaactatatttaatttctatagtaattttagaaaagatgttgaaaaagcagaaactgaa
atggaaaaagtagagattaaacaagaatttactggagaaagttgtccagagtgttcttca
ccacttgtatttaagttaggtaaatttggtaagtttattgcttgttctaactttcctgat
tgtagatacactaatactatccaaaaaaaagttggagtagtatgtccaaaatgtaagaaa
catgagattttagagaagaaatctaaaaaaggaaaattattctatggttgtgaaggattc
ccagaatgcgattttgtttcatgggataaacctataaatagaagttgcccaaaatgtgag
aatatcttatatgaagggaaaaaaggtgttctatgtggacattgtgattataaagaagaa
ataaaaaaatag
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