Gemella haemolysans: NCTC10459_00890
Help
Entry
NCTC10459_00890 CDS
T06551
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease recJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
gha
Gemella haemolysans
Pathway
gha03410
Base excision repair
gha03430
Mismatch repair
gha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC10459_00890 (recJ)
03430 Mismatch repair
NCTC10459_00890 (recJ)
03440 Homologous recombination
NCTC10459_00890 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gha03400
]
NCTC10459_00890 (recJ)
DNA repair and recombination proteins [BR:
gha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NCTC10459_00890 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NCTC10459_00890 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NCTC10459_00890 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
ssDNA-exonuc_C
DHHA1
tRNA_anti-codon
LYTB
Toprim
Motif
Other DBs
NCBI-ProteinID:
VEI38643
LinkDB
All DBs
Position
1:complement(979305..981566)
Genome browser
AA seq
753 aa
AA seq
DB search
MGIKYNWIYPNYDENFIKELESYSISKNIAKILNARNITDMTSVKKYFSDEYEEGYDPFL
MHDMQKAVDRINEAIENEEKILVYGDYDADGITSTVLLVETLISMGANVSSYIPNRFEEG
YGPNKEAFTKIIDSGITLIITVDNGIAGVEEVDLANELGCDVIVTDHHKIQDTIPNAYAI
IHPEHPEGNYPFKKLAGVGVAFKLAHALLEIFPDFLLDLVAIGTIADMVSITDENRIFVK
QGLELINEDPRIGLKMLLELSGIDTKIDEQTVGFYIAPKLNSIGRMDSAKLGLTFLMAEE
PVTARALAEQIEQYNIQRKQVTEDIVKDVISKIENSEKKQKNVIMVSGEYHEGVLGIVAS
NIVEKYQKPVFIMNEKEGVLKGSARSIFDFNIYVAMNKISDLFLAFGGHTLAAGFSFEKS
NFEKIEEFLDNEFEEFKQNNNLKANKNIDIVTSLEDISYQFLNSLDALKPYGMDFEKPTV
LIENAMVLNKAYFGSEKQYLRLTIADEVGNLDCITFKDSVTFDKVEKNDIIDLVCNIDKN
NFNGRTKLQAHIIDIHIKEFLFEDLRFINYDIANIDINCLKLSKYKDDKDNNFYQYKDLD
SLIDEEFEYIYLLDIPTSKEYLYKIINLKPKKVFLICEEKQVLSDVYLIDKNRLIKLFNL
ILSTNNKQINVAQQLDKLLAVLKTNVDSLKIMIQIFKELELINFVNNTIILNPDYKTVDL
KKSSSFISMENIFEVENLLLKESITNINKILEV
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgggcataaaatataactggatatatccaaattatgatgaaaattttattaaagaatta
gaatcatatagtatttcaaaaaatatcgctaaaatattaaatgcaagaaatattacagat
atgacttctgttaaaaagtatttttctgatgaatatgaagaaggttatgatccattttta
atgcatgatatgcaaaaagctgtagataggataaatgaagctatagaaaatgaagaaaaa
attcttgtctacggagattatgatgcggatggaattacatcaacagtattattagtagag
acattaatatctatgggggcaaatgtatcatcctatattccaaatcgatttgaagaagga
tatggaccaaacaaagaagcttttacaaagattattgattcaggaataactctaattatt
actgtcgacaatggaattgcaggtgtagaagaagttgatttagctaatgaattaggttgt
gatgttattgtgacagaccaccataaaattcaagatactatacctaatgcatatgcaata
attcatcctgaacatccagaaggtaactatccattcaagaaattagctggagtaggtgtt
gcttttaaactagcccacgcattattggaaatctttcctgatttcttattggatttagtt
gcaattggtacaatagctgatatggtctcaattacagatgaaaatagaatatttgtaaaa
cagggactagaattaataaatgaagatcctcgaataggtcttaagatgttacttgaacta
tcaggtatagatacaaaaatcgatgagcaaactgtaggtttttatatagcacctaaatta
aattctattggtagaatggatagcgctaaattaggtttaacttttcttatggcagaagag
cctgtaacagcgagagctttagctgaacagattgaacaatataatattcaacgaaaacag
gttacagaagacatagtaaaagatgtaataagtaaaattgaaaattcagaaaaaaaacaa
aagaatgttattatggtttctggtgaataccacgaaggtgtactaggcatcgtagcatcg
aatattgttgaaaagtaccaaaaaccagtttttattatgaacgaaaaagaaggggttctt
aagggttctgcgagaagtatttttgattttaatatctacgtagcaatgaacaaaatatca
gatttattcttagcattcggtggtcatacattggctgctggtttctcttttgaaaaatct
aattttgaaaagattgaagaatttttagataatgaatttgaagaatttaaacaaaataat
aatttgaaagctaataagaatatcgatattgttacttcactagaggatattagttatcaa
tttctaaattcattagatgctctaaaaccatatggtatggattttgaaaaacctactgta
ttaatagaaaatgcaatggttctgaataaagcatactttggttctgaaaaacaatattta
agattaacaatagcagatgaggttggaaatttagattgtattactttcaaagacagtgta
acttttgataaagttgagaaaaacgatattattgacttagtgtgtaacatagataaaaat
aactttaatggtcgtacaaaattacaggctcatattatagatatacatattaaagagttt
ttattcgaagatttgagattcataaactatgatattgcaaatattgatatcaattgttta
aaactctctaaatacaaagatgataaagataataatttctatcaatataaggatttagat
agcttaatagacgaggaatttgaatatatttatttactagatataccaacttctaaggaa
tatctatacaaaataataaatctaaaacctaaaaaagtgtttttaatatgtgaagagaag
caagttttatctgacgtatatcttattgataaaaatagattaattaaattatttaatcta
atactttcaacaaataacaaacaaataaatgtagctcaacaattagataaattactagcg
gtattaaaaacaaatgttgatagtttaaaaattatgattcaaatttttaaagaactagag
ttaattaattttgtaaataacactataatacttaatccagattataaaactgttgatttg
aaaaaatcatcaagttttataagtatggaaaatatatttgaagttgaaaacttactttta
aaagagagtattactaatattaataaaatacttgaagtttaa
DBGET
integrated database retrieval system
