Gemella haemolysans: NCTC10459_01196
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Entry
NCTC10459_01196 CDS
T06551
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
gha
Gemella haemolysans
Brite
KEGG Orthology (KO) [BR:
gha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gha03400
]
NCTC10459_01196 (addB)
Enzymes [BR:
gha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC10459_01196 (addB)
DNA repair and recombination proteins [BR:
gha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NCTC10459_01196 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
cobW
Motif
Other DBs
NCBI-ProteinID:
VEI38938
LinkDB
All DBs
Position
1:complement(1315833..1319678)
Genome browser
AA seq
1281 aa
AA seq
DB search
MNLELLIGPSGVGKTNYILNDIELNRDNHKIIVLTPEQNSFNFEKMLCDKFGGTFNIDVM
NFSSLTRKLSKQLGMDNLSRLGDNIKPFYFYKAAKNLESSDNFLVKRILQDVNFIEVVEE
IINELKEYKVSINVLEEYLEKDTNLDSSHKEKLEAILEIYVEYSRLLREQSSFDKVDYIT
ELLLYLEYIDLSDYIFYVDAYYNFTAQEYYYIGKLAEKSKKLIISVISDANRYFNFDLAQ
LVQGYELEKMKYNDLYLSDLYSKEKYKLDIFRKSHEIVASMNEIVKSNKDVNFSVVAFVK
KEEINTLKFKIKDNKVEEYEVLETHRGRFNGVSNDILADKYYKNFTAQYEIDDSIEIMCA
KNKELEVKRVAREIVKLKHNNINQNEIAILYRDSTYENYLNIFKDYNLDVHLDKNIETSN
HRLVKFIQETLYFDEDRFKTRLLNLLKTRLTNFENIYRQKAISHVLLGDLNIDEKQLEKD
IAELDENMIKDKFLASNLVNNIGGKYKYSDLLEKVRVVSIDDLENILNEKLVNMHSDILK
DYFIEKTTKYTTEQLEICRQVLLELIDKVSDVSAKNNLQAKRYIKKLVDVFNHCKIKMYL
DKEDGEYDNIEELKIDSIDRQVYKKILEYINDINENFGSEKFEYKKFVTLFNTGLTSIKY
RSIPEINNSIIMSTMDLAKVENKKVVFVLGFNKDVLPVSKSSGLIDDKDKERLISDNIFL
SPTKEAALIDEEFVAYIAMTRAQEKTYISYSLLDKSFKENFASPYLNTVRSLFPELEEKQ
TSKILEFSIADYNYYLENISEIVSTKEFNYLFAKIYRRFMEVKDSKTKEVEVLVELMIKF
LEHYQLTSVHESYENYEVLDELNDRVFFTNDTSIKNYLSKIIRDYRFQLSSEYIEEFLEI
KKDSFSKFSISKISDFERNPYQFFVKRVLGIEEERDIDIDNLVTGKFFHAVMSEKRITNF
IAECGSKFDIDLIKDEDIARRFNIKEILNDVIYSSNNKDILETSKLIELLNTHKYILNNM
IMRLEMAIAIEIKYFALTKFMPTFLEKPFSLEIVDNVITCKNVETGEINKKELQQKYNIP
PIKFTGVIDRVDVNGKNISIIDYKSSQSDFSLDSLELGFISQILTYALACELMFGKNSED
ILGIFYREIAKLGKDLKTYRLRGLANSDLILDDGFYEKAPEIMYVRTTKAKKIHGADSHK
AFTSPELEKLVNKNLENIMKLVEKIFEFNFSLDNYEIDNQYSTEKETLFNFASNSDTRLS
YKEKVELKPKDLKEKLLNDLK
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgaacttagaattattaattggtccaagtggtgtaggtaaaactaactacatattaaat
gatatcgaattaaatagagataaccataaaataattgtattaactccggaacagaacagt
tttaattttgaaaaaatgttatgtgataagttcggtggtacttttaatattgatgttatg
aatttctcaagtctaactagaaaattatcaaaacagttaggaatggataatcttagtaga
cttggagataatattaagccattctacttttataaagctgcaaaaaatttggaaagtagt
gataactttttagttaaaagaattctacaagatgttaattttatagaagttgtagaagaa
attataaatgaattaaaagagtataaagtaagtattaatgtattagaagagtatctggag
aaagatactaatctagatagtagtcataaagaaaaattggaagctattttagaaatatat
gttgaatattcgaggttattaagagaacagagttcttttgacaaagtagattatataact
gaattgctattgtatctagaatacattgatttaagtgactacattttctatgtagatgct
tattataactttacagcacaggaatattattacattggaaaactagctgagaagtctaaa
aagttaataattagtgttataagtgatgcaaatagatattttaattttgatttagcacaa
ctggttcaaggttatgaactagaaaagatgaaatataatgatctttatctatctgatttg
tatagtaaagaaaaatataagctagatatttttagaaaatctcatgagatagtcgctagt
atgaatgaaatagtgaaaagtaataaagatgttaatttttctgtagttgcatttgtaaaa
aaagaagaaataaatacgctgaaatttaaaataaaagataataaagtagaggaatatgaa
gtgttagaaactcatagaggacgctttaatggagtttctaatgatattcttgctgataaa
tattataaaaacttcacagcacagtatgagattgatgatagtattgaaattatgtgtgca
aaaaataaggagttagaggttaagcgagtcgctcgtgagattgtgaaattaaaacataat
aatatcaatcaaaatgagatagcaattctttatcgtgatagtacatatgaaaattattta
aatatattcaaagattataatttagacgttcatctagataaaaatatagaaactagcaat
caccgtttagttaagtttatacaagaaacattatattttgatgaagatagatttaaaact
agattattaaatctactaaaaactagattaacaaattttgagaacatttatcgacaaaaa
gcaatttcacatgttttactaggagatttaaatattgatgaaaaacaattagaaaaagat
attgcagagttagatgaaaacatgataaaagataagttcttagcaagcaatctagtaaat
aatataggtggaaaatataaatacagtgatttattagaaaaagttagagtagtttcaata
gatgatcttgaaaatatactaaatgagaaactggtaaatatgcatagtgatattttaaaa
gattactttattgaaaaaacgacgaagtatacgactgaacagcttgaaatttgtagacaa
gttttattagaacttattgataaggtttcagatgtctcagctaagaacaatcttcaagct
aagagatatataaaaaaattagtagatgtttttaatcattgcaaaattaaaatgtatctt
gataaagaagatggtgagtatgataacatcgaagagctaaaaattgatagtatagataga
caggtttacaaaaaaattcttgaatatattaatgatataaatgagaactttggtagtgaa
aagtttgaatataaaaaattcgtaactttatttaatactggattaacatctatcaagtac
cgttcaataccagagattaataattctattattatgtctactatggatttggcaaaagtt
gaaaataaaaaagtcgtctttgttttaggattcaataaggatgtattgccagtatctaaa
agttcaggattaatagatgataaagataaagaaagattaattagcgataatatcttttta
tcaccgacaaaagaagcggcacttattgatgaagagtttgtagcttatattgctatgaca
agagctcaagaaaagacatatataagttacagtttacttgataaaagttttaaagagaat
tttgcatctccatacttaaatactgtgagatctttattcccagaattagaagaaaagcaa
acttcaaaaattttagagttttctattgctgattataattactatttagaaaatatttca
gagatagtttcaactaaggaatttaattatctatttgcaaaaatttatcgtagatttatg
gaagtgaaagatagtaagacaaaggaagttgaagttttagtagagcttatgattaagttt
ttagaacattatcaacttacctcagtacatgaaagttatgagaattatgaagttcttgat
gaattaaatgacagagtatttttcactaatgatactagtattaaaaattatttatctaaa
ataattagagattataggtttcaacttagttcagaatatatagaggaatttttagaaatt
aagaaagatagtttttctaagtttagtatctctaaaatttctgatttcgaaagaaatcct
tatcaattctttgttaaacgagtacttggaatagaagaggaaagggatattgatattgat
aatcttgttactggaaaatttttccacgcagtaatgtcagaaaaaagaattactaatttt
atagctgaatgtggaagtaaatttgatatagacttgataaaagatgaagatattgcaaga
agatttaatattaaagagattttgaatgatgttatttattctagtaataacaaagatata
ttagaaacgtcgaagttgatagaattattgaatacacataagtatattttaaataatatg
attatgagacttgaaatggctatagcaatagaaataaaatactttgctttaacgaagttt
atgccaacgttcttggaaaaaccatttagtctggaaatagtagataatgttattacgtgt
aaaaatgtcgaaaccggggaaattaataagaaagaattgcaacagaaatataatatacca
ccaattaaatttacaggcgtaattgacagagtagatgttaatggaaagaatatttcaata
attgattataagagtagtcaaagtgatttttctttagatagtttagaattaggatttatc
tctcagattttaacttatgcgttggcatgtgaactcatgtttggtaaaaattcagaggat
atattaggtatattttatagagagatagctaagttaggtaaagatctaaaaacatataga
ttaagaggtttagcgaatagtgatttaatactagatgatggattttatgaaaaagctcct
gaaattatgtatgttagaactacaaaagctaagaaaattcatggagcagacagtcataaa
gcatttacaagtcctgaacttgaaaaattagttaataaaaatcttgaaaatataatgaaa
ttagtagagaaaatctttgaatttaatttttctctagataattatgaaattgataatcaa
tattctactgagaaggaaactttatttaactttgcaagtaatagtgatacacgactaagc
tataaagagaaggtagagctgaaaccaaaagatttaaaagaaaagttacttaatgaccta
aaataa
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