Gemella haemolysans: NCTC10459_01324
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Entry
NCTC10459_01324 CDS
T06551
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gha
Gemella haemolysans
Pathway
gha03030
DNA replication
gha03410
Base excision repair
gha03420
Nucleotide excision repair
gha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10459_01324 (polA)
03410 Base excision repair
NCTC10459_01324 (polA)
03420 Nucleotide excision repair
NCTC10459_01324 (polA)
03440 Homologous recombination
NCTC10459_01324 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gha03032
]
NCTC10459_01324 (polA)
03400 DNA repair and recombination proteins [BR:
gha03400
]
NCTC10459_01324 (polA)
Enzymes [BR:
gha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10459_01324 (polA)
DNA replication proteins [BR:
gha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC10459_01324 (polA)
DNA repair and recombination proteins [BR:
gha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCTC10459_01324 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10459_01324 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DUF1497
HHH_2
Motif
Other DBs
NCBI-ProteinID:
VEI39056
LinkDB
All DBs
Position
1:complement(1423711..1426350)
Genome browser
AA seq
879 aa
AA seq
DB search
MDKIILIDGNSLSYRAFYAMPALKNKKGLYTNSVYGFTLMLEKILADTNPKYALVAFDKG
KQTFRHQSYEAYKGTRDKTPSELVEQFGYVRELLDSYGIKYEEHFDYEADDIIGSYAKIA
EKEGLEVIIVTGDKDLTQLASENITIYYTKRGVTDIDYYTPEFIAEKYGLTPGQIVDMKG
LMGDKSDNIPGIAGVGEKTAIKLLTEYKTVENVLENIDNISGKKLKERLTEGREDALLSK
KLATIYTEVPVDNKLEDLTYSENVELKRELFEKLEFVSFLKKLSQETSTEEVDMTAEKTV
APKKEVSIVLADKNTKIDFTDSTLHVECYTEDYHNSDVVGIVVYKEGTAYIFSEEQFFTN
EFVVDYLQSEISKTVYDFKKILFIAKRNGVDINGEVFDVKIVSYLLDVNAKTEIDKIVFN
YLGKIMSSDEEIYGKGAKRTLPAQEVINPYIAEIAESIALIKPLMEEKLAEENMTDLYKD
IEIKVAKVLANMEYEGIHVSKKALEEMSAEFDERIKTLEASIYTLAGSEFNIASPKQLGV
VLFEDLGLPPIKKTKTGYSTAVEVLEQLQHSHEIIPLIMEYRTITKLNSTYAKGLVKDIT
REGKIHTRYEQTLAQTGRLSSVNPNLQNIPTRIEEGKKIRKAFVPASDDRVILSIDYSQI
ELRVLAHIAQDKGMIDAFKHDVDIHTKTASDVNGVSLDEVTSSMRREAKAVNFGIVYGIS
DFGLSNNLGITRKRAKEFIDKYLETFKGVDKYMTDIVDFAREHGYVETLFNRRRALPDIN
AKNKIVANLNARIAMNSPIQGTAADIIKIAMVNVFEYLEKTNVDAKLLLQVHDELIFDVN
KDIEEEFTKEMIKIMEEAANLDVQLKAEASSGASWYDAK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggataagataatattaatagatggtaatagtttgagttatcgtgctttttacgctatg
ccagctttaaaaaataaaaaaggactttatacaaatagtgtatatggttttacattgatg
ctagaaaaaatattggcagacactaatccaaagtatgcgttagttgcctttgataagggg
aaacaaacgtttagacatcaaagttatgaagcatacaaaggtactagggataaaactcct
agtgagttagtagaacaattcggatatgttagagagcttcttgattcatatggaataaag
tatgaagaacattttgattatgaagcggatgatattattggaagttatgctaaaatcgct
gaaaaagaaggtttagaagtaataatagtgactggagataaagatttaactcaactagct
agtgaaaatataacaatttactatactaagcgtggtgttacagatatagattattatacg
cctgagtttattgctgaaaaatatggattaactccgggacaaatcgttgacatgaaaggt
cttatgggggacaagagtgataatatcccaggaattgcaggagttggtgaaaaaactgcg
ataaaattattgactgaatataaaactgtagaaaatgtactagaaaatattgataatatt
agtggtaaaaaactaaaagagcgactaacagaaggtcgagaagatgctctattaagtaaa
aaactagcaactatttatactgaagttccagttgataataagttagaagatttaacatat
agtgagaatgtagaactaaaaagagagttatttgaaaaacttgaatttgtttcattttta
aaaaaattatctcaagaaacttctactgaagaggtggacatgactgctgaaaagacagtt
gctcctaaaaaggaagttagtattgttttagcagataaaaatacgaaaatagattttacc
gacagtactttacatgttgagtgttatacggaagattatcataattcagatgtagttgga
atagtagtctataaagaaggaactgcttatatttttagtgaagaacaatttttcactaat
gagtttgtagtagattatcttcaaagtgaaatttctaaaactgtttatgattttaaaaag
attttatttatagcgaagagaaacggcgtagatattaatggagaagttttcgatgtgaaa
attgtatcttatcttcttgatgttaatgccaaaactgaaattgataaaatagtctttaac
tatcttggaaaaataatgagtagtgatgaagaaatatatggtaagggggcaaaacgaact
ttaccggctcaagaagttattaatccgtatatagctgaaattgcagagagtattgcattg
ataaaaccattgatggaagaaaaacttgcagaagaaaatatgacggacttgtataaagat
atagagattaaagtggctaaagtattagctaatatggaatatgaaggaatacatgttagt
aaaaaagcacttgaagaaatgagtgctgagtttgatgaaagaattaaaactttagaagct
agcatatatactttagctggttctgaattcaatatagcttcacctaagcagctaggagta
gtattatttgaggatctaggactaccaccgattaagaaaacaaaaactggttattctaca
gccgtagaggtactagaacaactacaacatagtcatgaaattattccgttaattatggag
tatagaacaattacaaaattaaattcaacttatgcaaaagggttagtaaaagatattact
cgtgaagggaaaatccatacacgttatgagcaaacattagctcaaacaggacgcttatcg
tcagtgaatccaaatcttcaaaatataccaacgagaattgaagaagggaaaaaaatcaga
aaagcatttgttccagcctctgatgatagagtaatcttatctattgactattcgcaaata
gagcttagagtattagctcatatcgcacaagacaaaggaatgatagatgcctttaaacat
gatgtagatattcatactaaaacagctagtgatgttaacggagttagccttgatgaggtg
acatcttcaatgcgtcgagaagctaaagctgttaactttggtattgtttatgggatttct
gattttggtctatctaacaaccttggaattactagaaaacgtgcgaaagaatttattgac
aaatatttagaaacattcaaaggtgttgataagtatatgactgatatcgtagattttgca
agagaacacggttatgtagaaactttattcaatagaagaagagcattaccagatattaat
gcgaagaataaaattgtagctaatctaaatgcgcgtattgcgatgaattcaccaattcaa
ggaactgctgcggatattataaaaatagctatggttaatgtatttgaatatttagaaaaa
acaaatgtagatgcaaaattattattacaagtacatgatgaattaatatttgatgtaaat
aaagatatagaagaagagtttacaaaagaaatgattaaaattatggaagaagcggctaat
ttagatgttcaactgaaagctgaagctagtagtggagcgtcatggtatgatgctaaataa
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