Gemella haemolysans: NCTC10459_01651
Help
Entry
NCTC10459_01651 CDS
T06551
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gha
Gemella haemolysans
Pathway
gha03030
DNA replication
gha03430
Mismatch repair
gha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10459_01651 (dnaE)
03430 Mismatch repair
NCTC10459_01651 (dnaE)
03440 Homologous recombination
NCTC10459_01651 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gha03032
]
NCTC10459_01651 (dnaE)
03400 DNA repair and recombination proteins [BR:
gha03400
]
NCTC10459_01651 (dnaE)
Enzymes [BR:
gha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10459_01651 (dnaE)
DNA replication proteins [BR:
gha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC10459_01651 (dnaE)
DNA repair and recombination proteins [BR:
gha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC10459_01651 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
VEI39365
LinkDB
All DBs
Position
1:complement(1780441..1783710)
Genome browser
AA seq
1089 aa
AA seq
DB search
MYYNMQVHSAYDLLNSTIKYESLFSKLAKDNQKSVVIVDPNMYGAIKAYKASKKVGINLI
QGLEVNLGYGIGLLKFNLLCKTEKMFYKLLEISTKFMNGEEWTVEDFANDMIDYREDFVL
TVVDELRDSMEFSYLKNLLSKYDFYFGFNESFQVGLYSDYDNIVYTKPSFYLNKEHYQQV
IVSRAIRDNKKLNIQGLTTISGDDFVREKKDFEEILALGDEELYAIFEKSFANQKLIIDS
CEYELNFSGYHLPKYIYGEKEEIFEKLSSKEYLHYLVQKGVKEKLIGKDLYQYQKRYSYE
LKIIDEMGFNDYFLIVYDFVKYAKDNGILVGAGRGSAAGSLVCYLLDITEADPLEYNLLF
ERFLNKERISMPDIDIDFQDTRRDEVIKYVEEKYGSDKVAQIITFTTFQSKSAARESARI
LQFDEQTLKFISSNISSTRTLKECYEISEELRTFINTSNINKRWFSIALSLEHLPKNPSV
HAAGIVISDDKPLVNYTPLAESNMTKYLTQWTMDDVESVGLLKIDFLGIRYLTMVSSIVE
EIRKENPAFDITKINYQDPKVYELFAKGKTEGIFQFESSGMKEKLNLLKPTEFNDIVAMN
ALYRPGPMAQIEVYVRRKNKEEQVIYPHPHLEKILKDTYGVIVYQEQIMLIAVNFAHMSL
NEADNMRRAVSKKKKEDLEYYGRIFVEKSVAAGYDIKVAEKLFDLIVTFANYGFNKSHAV
VYSMLAYRLAYLKVYYTKHFMTALLNNVISSEKKINEYKQELMNLGINLVKPDVNRSLAN
FRVFKNDIVFALTAIKNVGYRSGYEIVQDRINFGPYLDIDDFLKRMNKKVDYQAAVSLVK
AGALDTFGYNRATLMKKVNDYYSDNRQFINNVRVALSAESGLTLKVEEIEDYSITEKIQM
EKEVTGTYFLKHPVQVEKEKYSYLPLQYIGGEVSDSYVEIITRKEIRTKNGDYMAFLTVN
DGKNDYDVTVFPSVFKYANVFIKAGSFAVMTLKKQLRNGREQYILEKIASLRNYREYCLT
NIKTIYTIIDKEILELLSEYKVDAGRVKVIALLDNDSTKGKTITINNEHEFVQKFLEKFP
GKRIKITYK
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgtattacaatatgcaagtacatagtgcatatgacttattgaatagtacaattaagtat
gagagtctgttttcaaaattagctaaagataatcagaaatcagtagttatcgtagatccg
aatatgtacggtgctattaaagcttataaagcttctaaaaaggtaggaataaatttaatt
caaggtttagaagttaacttaggctatggaatagggcttttaaaatttaatttactgtgt
aaaacggagaagatgttttataaattattagaaatttcgacgaagtttatgaatggagaa
gagtggactgtagaagattttgctaatgatatgattgattacagagaagactttgtcttg
actgttgtagatgaacttagggatagtatggaattctcctatttaaaaaatttactaagt
aagtatgatttttattttggttttaatgagagtttccaggtaggtctttatagtgattat
gataatattgtttatactaaaccaagtttctacctaaataaagagcactatcagcaagtt
attgttagtcgtgctattcgcgataacaaaaagcttaatatacagggacttacgactatc
tcaggagatgactttgtcagagaaaaaaaggattttgaagaaatcttagctctaggggat
gaagagttatatgctattttcgaaaaatcatttgctaatcaaaaattaataatagatagc
tgtgaatatgaattgaatttttcgggatatcatttgcctaagtatatctacggagaaaaa
gaagagatattcgaaaagttgtcttctaaagagtacttgcattacttagttcaaaaaggt
gttaaggaaaagttaataggtaaagatttatatcagtatcaaaagcgatatagttatgaa
cttaagattatcgatgagatgggcttcaacgactatttcttaattgtttatgattttgta
aagtatgccaaagataatggtatattagtaggtgcaggacgtggtagtgctgctgggagt
ttagtatgttatttactagatataacagaagcggatccattggaatacaatcttctgttt
gaaagatttttaaacaaagagcgtatttctatgcctgatatagatatagacttccaagac
accagacgtgatgaagtcataaaatatgtggaagaaaaatatggttctgataaggtagcg
cagattattacttttacaacatttcaatcgaaaagtgcagctagagaatcggcgagaata
ttgcagtttgacgaacaaactctgaagtttattagtagtaatattagctctacaagaaca
ttaaaagaatgttatgaaatatcagaagaattaagaacgtttattaatacaagtaatatt
aataagcgttggtttagtatagcgctaagtttagagcatttaccgaaaaatccatcggta
cacgcagccggtatagtaataagtgatgacaaaccattggttaactatacacctttagct
gaatcgaatatgacgaagtacttaactcagtggacgatggatgatgtagagagtgttggt
ttattaaaaatagatttcttaggtattagatatctgactatggtatcgagtattgtcgaa
gaaattagaaaagagaatccggcatttgatataacaaagataaattatcaagatcctaag
gtctatgaattatttgcaaaaggtaagacagaaggtatcttccagtttgaatcaagtgga
atgaaggagaaattgaatctactaaaacctactgaatttaatgatattgtcgctatgaat
gctctttatagaccgggaccaatggctcaaatagaagtctatgtacgtaggaaaaataaa
gaagagcaagtgatatatccacatccgcatttagagaaaatattaaaggatacttatggg
gtaattgtttatcaagaacagattatgttgattgcggtgaacttcgcccatatgagcctc
aatgaagcggataatatgagaagggcggtaagtaagaagaaaaaagaagacctagagtat
tatggacgaatcttcgtagagaaaagtgttgcagctggctacgatataaaagtcgccgag
aaactttttgatcttattgttacctttgcgaattatggttttaataagagtcacgcggta
gtatacagtatgctagcttaccgtttagcatatttaaaagtctactatactaagcatttt
atgacagctttattaaataacgtaataagcagtgagaagaaaataaatgaatacaagcaa
gagcttatgaatctaggtattaatttagtaaaacctgatgttaatagaagtttagctaat
tttagagtttttaaaaatgatattgtttttgcattgactgcgataaaaaatgttggttat
agaagtggttatgaaatagttcaagacagaattaattttggaccttatctagacatagat
gatttcttgaaacgtatgaataagaaggttgattatcaagctgcagtttcactggttaag
gctggcgcgttagatacttttggttataaccgagctactttgatgaaaaaggtaaatgat
tattattcagataacaggcagtttataaataatgtacgtgttgcgttgtctgcagaaagt
ggtctaacattaaaggtagaagagatagaagactattcaatcacagaaaaaatccaaatg
gaaaaagaagtcacagggacatacttcttaaaacatccagtccaagtagaaaaagagaag
tattcttatttaccactacaatacattggtggtgaagttagcgatagttatgtagaaatc
ataacgagaaaagagatacgaactaaaaatggcgattatatggcatttttaacagttaac
gatggaaaaaatgattatgatgttactgtttttccaagtgtattcaagtatgctaatgta
tttataaaagcaggaagtttcgctgttatgactttgaaaaaacaacttcgtaatggtaga
gaacagtacattttagaaaaaattgctagtttaagaaattatagagaatactgcctaact
aatataaaaactatctatacaattattgataaagaaatattagagcttttaagtgaatat
aaggttgatgctggaagagttaaggtgatagccttgcttgataatgattctacaaaagga
aaaacgattacaataaataacgaacatgagtttgttcagaaatttttggaaaaattccct
ggaaaacgcatcaaaatcacatataagtaa
DBGET
integrated database retrieval system
