Geoalkalibacter halelectricus: L9S41_02250
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Entry
L9S41_02250 CDS
T09882
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ghc
Geoalkalibacter halelectricus
Pathway
ghc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ghc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L9S41_02250 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghc03400
]
L9S41_02250 (uvrA)
DNA repair and recombination proteins [BR:
ghc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L9S41_02250 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L9S41_02250 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_21
AAA_23
AAA_25
nSTAND1
AAA_33
AAA_18
ATPase
RsgA_GTPase
BCA_ABC_TP_C
nSTAND3
SLFN-g3_helicase
AAA_14
DnaJ_CXXCXGXG
ExoX-like_C
Sgf11
Motif
Other DBs
NCBI-ProteinID:
UWZ80231
LinkDB
All DBs
Position
544442..547300
Genome browser
AA seq
952 aa
AA seq
DB search
MTKYIRIRGAREHNLKNLDVDIPRDQLVVITGVSGSGKSTLAFDTIYAEGQRRYVESLSA
YARQFLEQMQKPDVESIEGLSPAISIEQKTTSRNPRSTVGTVTEIYDYLRLLFARAGTVH
CPGCGREIAAQTVQQMVDQILAWPDKTRVMLLAPMVRGRKGEYRKELKQLLAEGFVRVRI
DGQMHELSEPIALDKNKQHTLEVVVDRLVIKEGIATRLADSLETALKLADGLVEVEIVGG
PDLAEAVRPDALQAGQSILFSSRHACIECGVSLPEITPRMFSFNNPHGACPECTGLGTRN
YFDPDLVVPNPELSLREGAIIPWETRTGVYYQQLLEALSEHFSFSVTTPFAELPESLRHI
LLHGSGEETVRFFFDQGGRRHFYDKPFEGVIPHLQRRYQESGSDSVRENLERFMGQMPCP
SCQGARLRPESLCVTIGGRNIREVCAQSISTAHDFFCTLELPAQKAEIARRVLKEIRERL
SFLAHVGLDYLSLERSAGTLSGGEGQRIRLATQIGSSLTGVLYILDEPSIGLHQRDNRRL
LDTLKRLRDLGNTVLVVEHDEETILEADHILDLGPGAGVHGGLIVASGSPEEILADPNSL
TGRYLSGALRIALPAARRVPTRFLNILGACANNLRDIDVRIPLGVFTCVTGVSGSGKSTL
VIDTLFRALGQRLYRSKDKAGKVKEILGLEHLDKVIDIDQSPIGRTPRSNPATYTGVFGD
IRDLFAQLPEAKLRGYKPGRFSFNVKGGRCEACQGDGILKIEMHFLPDVYVTCEVCRGAR
YNRETLEIKYKGKSIAEVLDMTVNQAAAFLENIPRIRAKLETLREVGIGYIKLGQSATTL
SGGEAQRVKLAKELSRRATGRTIYILDEPTTGLHFADIQKLLDVLQRLVEAGNTVVVIEH
NLDVIKTADHIIDLGPEGGSRGGEVVVCGTPEEVARHSLSHTGRYLRPYLDL
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatacatccgcattcgcggcgcgcgcgaacacaatctgaaaaatctcgatgtc
gatatcccgcgcgaccaactggtggttatcaccggggtgtcgggttcgggcaagtcgacc
ctggccttcgataccatctatgccgaaggccagcgccgctatgtcgagagcctctcggcc
tacgcgcggcaatttctcgaacagatgcaaaagcccgacgtcgagtccatcgaggggctc
tcgcccgccatctccatcgagcaaaaaaccacctcccgcaatccgcgctccacggtcggc
accgtgaccgagatctacgattacctgcgcctgctgttcgcacgcgccggcacggtgcat
tgcccgggctgcggccgggagatcgccgcgcagacggtgcagcagatggtcgatcagatt
ctcgcctggccggataaaacccgcgtgatgctgctggcccccatggtgcgcggacgcaag
ggcgaataccgcaaggaactcaagcaactgctcgccgagggctttgtgcgcgtgcgcatc
gacgggcaaatgcacgagctgagcgagcccatcgccctggacaagaacaagcagcacacc
ctggaggtggtcgtcgaccggctggtcatcaaggagggcatcgccacacgcctggccgat
tccctggaaaccgccctcaagctggccgacggactggtcgaggtggagatcgtcgggggg
ccggatttagccgaggcggtgcgtccggatgcgctccaggcggggcaatcgattctgttc
tcctcgcgccacgcctgcatcgagtgcggggtgtcgctgcccgaaatcaccccgcgcatg
ttctccttcaacaatccccatggcgcctgcccggaatgcaccggcctgggcacgcgcaat
tacttcgaccccgacctggtggtgcccaatcccgagctgtccctgcgcgagggcgccatc
atcccctgggaaacccgcaccggggtctattatcagcagctcctcgaagccctctccgaa
catttctcttttagcgtcaccacgcccttcgccgagctgcccgagagcctgcgccacatc
ctgctgcacggctcgggcgaggagaccgtgcgctttttcttcgatcagggcggccggcgc
catttctacgacaagcccttcgagggagtgattccccatttgcagcggcgctaccaggaa
tcgggttcggattcggtgcgcgagaacctcgaacgcttcatgggccagatgccctgcccg
agttgccagggcgcgcgcctgcgcccggagtctttgtgcgtgaccatcggcgggcgcaac
atccgcgaggtttgcgcgcagtccatcagcaccgcgcacgattttttctgcaccctggag
ctgccggcgcaaaaagccgagatcgcccgccgggtgctcaaggaaattcgcgagcggctc
tcctttctcgcccatgtggggcttgactatctgagcctggagcgcagcgccggcaccctc
tccggcggcgagggccagcgcatccgcctggcgacgcagatcggctcatccctcaccggg
gtgctctacatcctcgatgagccgagcatcggcctgcaccagcgcgacaaccgccgcctg
ctcgacaccctcaagaggctgcgcgatctgggcaacacggtgctggtggtggagcatgac
gaggaaaccatcctcgaggccgaccatatcctcgacctggggccgggcgccggagtgcac
ggcggcctaatcgtcgccagcggcagccccgaggaaatactcgccgaccccaactccctc
accgggcgctacctcagcggcgccctgcgcatcgccctgcccgccgcacgtcgggtgccg
acgcgctttctgaacatcctgggcgcctgcgccaacaacctgcgcgatatcgacgtgcgc
attcccctcggtgtgttcacctgcgtcaccggggtctccggctcgggcaaatcgaccctg
gtcatcgacaccctgtttcgcgccctcggccagcgcctttaccgcagcaaggataaagcc
ggaaaggtcaaggagatcctcggtctggagcatctcgacaaggtcatcgacatcgaccaa
tcgcccatcggccgcacgccgcgcagcaaccccgccacctacaccggggtgttcggcgac
atccgcgatctcttcgcgcaactgcccgaggccaagctgcgcggctacaagccggggcgg
ttttccttcaacgtcaagggcgggcgctgcgaggcctgccagggcgacggcatcctcaag
attgaaatgcactttctgcccgatgtctacgtcacctgcgaggtatgccgcggcgcgcgc
tacaaccgcgaaaccctggaaatcaagtacaagggcaaaagcatcgccgaggtgctcgac
atgaccgtcaaccaggcggccgcctttctcgagaacatcccacgcatccgcgccaagctc
gaaaccctgcgcgaagtcggcatcggctacatcaagctcggccagagcgccaccaccctc
tccggcggcgaggcgcagcgcgtcaaactggccaaggagctgagccgccgcgccaccggc
cgcaccatctacattctcgacgaacccaccacgggtctgcatttcgccgacatccagaag
ctcctcgacgtgctccagcgcctggtcgaggccggcaacacggtggtcgtcatcgagcac
aacctcgatgttatcaagaccgccgatcacatcatcgacctcggccccgaaggcggcagc
cgcggcggcgaagtggtggtgtgcggcacgcccgaagaggtggcgcgccattccctctcc
cacaccggacgctacctgcgcccctacctggacctgtga
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