KEGG   Geoalkalibacter halelectricus: L9S41_02250
Entry
L9S41_02250       CDS       T09882                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
ghc  Geoalkalibacter halelectricus
Pathway
ghc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ghc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    L9S41_02250 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ghc03400]
    L9S41_02250 (uvrA)
DNA repair and recombination proteins [BR:ghc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     L9S41_02250 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      L9S41_02250 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 AAA_21 AAA_23 AAA_25 nSTAND1 AAA_33 AAA_18 ATPase RsgA_GTPase BCA_ABC_TP_C nSTAND3 SLFN-g3_helicase AAA_14 DnaJ_CXXCXGXG ExoX-like_C Sgf11
Other DBs
NCBI-ProteinID: UWZ80231
LinkDB
Position
544442..547300
AA seq 952 aa
MTKYIRIRGAREHNLKNLDVDIPRDQLVVITGVSGSGKSTLAFDTIYAEGQRRYVESLSA
YARQFLEQMQKPDVESIEGLSPAISIEQKTTSRNPRSTVGTVTEIYDYLRLLFARAGTVH
CPGCGREIAAQTVQQMVDQILAWPDKTRVMLLAPMVRGRKGEYRKELKQLLAEGFVRVRI
DGQMHELSEPIALDKNKQHTLEVVVDRLVIKEGIATRLADSLETALKLADGLVEVEIVGG
PDLAEAVRPDALQAGQSILFSSRHACIECGVSLPEITPRMFSFNNPHGACPECTGLGTRN
YFDPDLVVPNPELSLREGAIIPWETRTGVYYQQLLEALSEHFSFSVTTPFAELPESLRHI
LLHGSGEETVRFFFDQGGRRHFYDKPFEGVIPHLQRRYQESGSDSVRENLERFMGQMPCP
SCQGARLRPESLCVTIGGRNIREVCAQSISTAHDFFCTLELPAQKAEIARRVLKEIRERL
SFLAHVGLDYLSLERSAGTLSGGEGQRIRLATQIGSSLTGVLYILDEPSIGLHQRDNRRL
LDTLKRLRDLGNTVLVVEHDEETILEADHILDLGPGAGVHGGLIVASGSPEEILADPNSL
TGRYLSGALRIALPAARRVPTRFLNILGACANNLRDIDVRIPLGVFTCVTGVSGSGKSTL
VIDTLFRALGQRLYRSKDKAGKVKEILGLEHLDKVIDIDQSPIGRTPRSNPATYTGVFGD
IRDLFAQLPEAKLRGYKPGRFSFNVKGGRCEACQGDGILKIEMHFLPDVYVTCEVCRGAR
YNRETLEIKYKGKSIAEVLDMTVNQAAAFLENIPRIRAKLETLREVGIGYIKLGQSATTL
SGGEAQRVKLAKELSRRATGRTIYILDEPTTGLHFADIQKLLDVLQRLVEAGNTVVVIEH
NLDVIKTADHIIDLGPEGGSRGGEVVVCGTPEEVARHSLSHTGRYLRPYLDL
NT seq 2859 nt   +upstreamnt  +downstreamnt
atgaccaaatacatccgcattcgcggcgcgcgcgaacacaatctgaaaaatctcgatgtc
gatatcccgcgcgaccaactggtggttatcaccggggtgtcgggttcgggcaagtcgacc
ctggccttcgataccatctatgccgaaggccagcgccgctatgtcgagagcctctcggcc
tacgcgcggcaatttctcgaacagatgcaaaagcccgacgtcgagtccatcgaggggctc
tcgcccgccatctccatcgagcaaaaaaccacctcccgcaatccgcgctccacggtcggc
accgtgaccgagatctacgattacctgcgcctgctgttcgcacgcgccggcacggtgcat
tgcccgggctgcggccgggagatcgccgcgcagacggtgcagcagatggtcgatcagatt
ctcgcctggccggataaaacccgcgtgatgctgctggcccccatggtgcgcggacgcaag
ggcgaataccgcaaggaactcaagcaactgctcgccgagggctttgtgcgcgtgcgcatc
gacgggcaaatgcacgagctgagcgagcccatcgccctggacaagaacaagcagcacacc
ctggaggtggtcgtcgaccggctggtcatcaaggagggcatcgccacacgcctggccgat
tccctggaaaccgccctcaagctggccgacggactggtcgaggtggagatcgtcgggggg
ccggatttagccgaggcggtgcgtccggatgcgctccaggcggggcaatcgattctgttc
tcctcgcgccacgcctgcatcgagtgcggggtgtcgctgcccgaaatcaccccgcgcatg
ttctccttcaacaatccccatggcgcctgcccggaatgcaccggcctgggcacgcgcaat
tacttcgaccccgacctggtggtgcccaatcccgagctgtccctgcgcgagggcgccatc
atcccctgggaaacccgcaccggggtctattatcagcagctcctcgaagccctctccgaa
catttctcttttagcgtcaccacgcccttcgccgagctgcccgagagcctgcgccacatc
ctgctgcacggctcgggcgaggagaccgtgcgctttttcttcgatcagggcggccggcgc
catttctacgacaagcccttcgagggagtgattccccatttgcagcggcgctaccaggaa
tcgggttcggattcggtgcgcgagaacctcgaacgcttcatgggccagatgccctgcccg
agttgccagggcgcgcgcctgcgcccggagtctttgtgcgtgaccatcggcgggcgcaac
atccgcgaggtttgcgcgcagtccatcagcaccgcgcacgattttttctgcaccctggag
ctgccggcgcaaaaagccgagatcgcccgccgggtgctcaaggaaattcgcgagcggctc
tcctttctcgcccatgtggggcttgactatctgagcctggagcgcagcgccggcaccctc
tccggcggcgagggccagcgcatccgcctggcgacgcagatcggctcatccctcaccggg
gtgctctacatcctcgatgagccgagcatcggcctgcaccagcgcgacaaccgccgcctg
ctcgacaccctcaagaggctgcgcgatctgggcaacacggtgctggtggtggagcatgac
gaggaaaccatcctcgaggccgaccatatcctcgacctggggccgggcgccggagtgcac
ggcggcctaatcgtcgccagcggcagccccgaggaaatactcgccgaccccaactccctc
accgggcgctacctcagcggcgccctgcgcatcgccctgcccgccgcacgtcgggtgccg
acgcgctttctgaacatcctgggcgcctgcgccaacaacctgcgcgatatcgacgtgcgc
attcccctcggtgtgttcacctgcgtcaccggggtctccggctcgggcaaatcgaccctg
gtcatcgacaccctgtttcgcgccctcggccagcgcctttaccgcagcaaggataaagcc
ggaaaggtcaaggagatcctcggtctggagcatctcgacaaggtcatcgacatcgaccaa
tcgcccatcggccgcacgccgcgcagcaaccccgccacctacaccggggtgttcggcgac
atccgcgatctcttcgcgcaactgcccgaggccaagctgcgcggctacaagccggggcgg
ttttccttcaacgtcaagggcgggcgctgcgaggcctgccagggcgacggcatcctcaag
attgaaatgcactttctgcccgatgtctacgtcacctgcgaggtatgccgcggcgcgcgc
tacaaccgcgaaaccctggaaatcaagtacaagggcaaaagcatcgccgaggtgctcgac
atgaccgtcaaccaggcggccgcctttctcgagaacatcccacgcatccgcgccaagctc
gaaaccctgcgcgaagtcggcatcggctacatcaagctcggccagagcgccaccaccctc
tccggcggcgaggcgcagcgcgtcaaactggccaaggagctgagccgccgcgccaccggc
cgcaccatctacattctcgacgaacccaccacgggtctgcatttcgccgacatccagaag
ctcctcgacgtgctccagcgcctggtcgaggccggcaacacggtggtcgtcatcgagcac
aacctcgatgttatcaagaccgccgatcacatcatcgacctcggccccgaaggcggcagc
cgcggcggcgaagtggtggtgtgcggcacgcccgaagaggtggcgcgccattccctctcc
cacaccggacgctacctgcgcccctacctggacctgtga

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