Geoalkalibacter halelectricus: L9S41_03165
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Entry
L9S41_03165 CDS
T09882
Name
(GenBank) hypothetical protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ghc
Geoalkalibacter halelectricus
Pathway
ghc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ghc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L9S41_03165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghc03019
]
L9S41_03165
Enzymes [BR:
ghc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
L9S41_03165
Messenger RNA biogenesis [BR:
ghc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
L9S41_03165
BRITE hierarchy
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
UWZ80413
LinkDB
All DBs
Position
741469..742761
Genome browser
AA seq
430 aa
AA seq
DB search
MINLKRFLENNPNLKKFQGFLPEGQPCYLVGGAVRDILLEREIHDFDFALPEDPTALAQA
WARHSRGHWFWLDEARRQSRVVLGRGSQEPTFDFSPFRAPDLEGDLRGRDFTLNALAIDM
QRAAAPVLIDPLNGARDLAEGRLRACSPTSFRDDPLRVLRAARFAAAFHLHPDEQTLALA
REAAPRLAQIAGERIKAELFALFSVDDPRVGLEVLVQSGGGENLFGPDSPASLHQTLELT
SEFCRSLSTLPESRAWLAAEVEAGLNRSALLRLGVLLRSLATPVDFPQLRERLALARMTS
RRLEALLAFNPETLAPPPDAPQSQRRLALWAERLGPDPADALLFLACQKGADQYPPALLF
QALHAWQALNKQGRIAPLVGGDWIRRELQIADGLKIGRLLDLLAEAECQGLVDAPETAQK
FLKSLAEKGD
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
gtgataaacctcaagcgatttcttgaaaacaatcccaatctaaagaaatttcaagggttt
cttcccgagggccagccctgctacctggtcgggggagcggtgcgcgacattctgcttgag
cgcgaaattcacgactttgattttgccctgcccgaagatcctaccgccctggcgcaagcc
tgggcgcgccacagccgcgggcattggttctggttggatgaagcgcggcgccaaagccgg
gtggtgctcggtcgcggttcgcaggaaccgacctttgacttttcgccttttcgcgccccg
gatctcgaaggggatttgcgcggccgagattttaccctcaatgccttggccatcgacatg
cagcgtgccgccgccccggtgcttatcgatcccttgaatggggcgcgtgatttggccgag
ggccgactcagggcctgctctcccaccagcttcagggacgatcccctgcgggttttgcgc
gcggcgcgttttgccgcggcgtttcatctgcatcccgatgagcagacccttgccctggcc
cgggaggcagcaccgcgcttggcccagattgccggcgagcgcatcaaggccgaactcttt
gcgctcttttccgttgacgatccgcgtgttgggcttgaggtcctggttcaatccggcggc
ggagaaaatttgttcgggcctgatagtccggcgagcctgcaccagacgctggaattgact
tcggaattttgccggtctctgagcactcttccggaaagccgtgcctggcttgccgccgag
gtcgaggccggcttgaaccgtagcgccttgttgcggttgggtgttttactgcgatctctt
gcaacacctgtggattttccccaactacgcgaacgcctcgccctggcgcgcatgacctcc
aggcgcctggaggctctgctggcgttcaatccagaaactctggcaccacccccggatgct
cctcaaagccaacgccgacttgccctgtgggccgagcgactgggtccggatcccgcggac
gccctcttgttccttgcctgtcaaaagggcgcggatcagtacccgccagcccttttgttc
caagccctgcacgcctggcaggcattgaacaagcaggggcggatagcgcccctggtcggt
ggcgattggattcgccgcgaactccagatcgccgacggcctaaagattggccgattgctg
gacctcctcgccgaagccgaatgccagggcctggtcgatgctccggaaacggcccaaaag
ttcctgaaatccctggccgaaaaaggtgattga
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