Geoalkalibacter halelectricus: L9S41_03220
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Entry
L9S41_03220 CDS
T09882
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ghc
Geoalkalibacter halelectricus
Pathway
ghc03030
DNA replication
ghc03430
Mismatch repair
ghc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ghc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L9S41_03220 (holB)
03430 Mismatch repair
L9S41_03220 (holB)
03440 Homologous recombination
L9S41_03220 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghc03032
]
L9S41_03220 (holB)
03400 DNA repair and recombination proteins [BR:
ghc03400
]
L9S41_03220 (holB)
Enzymes [BR:
ghc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L9S41_03220 (holB)
DNA replication proteins [BR:
ghc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L9S41_03220 (holB)
DNA repair and recombination proteins [BR:
ghc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L9S41_03220 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
Motif
Other DBs
NCBI-ProteinID:
UWZ80421
UniProt:
A0ABY5ZT68
LinkDB
All DBs
Position
complement(757156..758121)
Genome browser
AA seq
321 aa
AA seq
DB search
MIFSQILGHERQKDILRRVLASDRLAHAYLFIGPEGIGKRLMALALVRAVVCPHKGCGDC
IACRKVDHFNHPDLHVLEPDGNAIKIEQVRAIQREFSYRPLEAPKKVCLIEQAEKLVPAA
GNALLKTLEEPSGEALFILLSAHPEQLLQTIRSRCQPLHFHRIPNELLKRDLVQRLEIDD
AAGHLLAALSDGSFRKALGRDRELFISGRRDFLKAVTALSPGSVLPLFDLSQELADQKEQ
LPEYLEILEAFYRDLLLSLHGRPADDLVNIDLLEKVRRCAARETPGSVLSKLEAIQAARR
HLNRNVNRQLAMDHLLLQLCA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgattttctctcaaattctcggtcacgagagacaaaaagacattctgcgccgcgttctc
gcctccgatcgcctggcgcatgcctatctgttcattggtcccgagggtatcggcaaacgc
ttgatggccctggctctggtgcgtgcggtggtttgcccccacaagggttgcggcgactgc
atcgcctgccgcaaggtcgatcacttcaaccacccggacctgcacgtgctcgaacccgac
ggcaacgccatcaagatcgagcaggtccgcgccatccagcgcgagttctcctaccgtccc
ttggaggcgcccaagaaggtctgcttgatcgagcaggccgaaaagttggtgccggcggca
ggcaatgctctgctcaaaacccttgaggaaccttcgggcgaggcgctgttcatccttttg
agcgcccaccccgagcagttgctgcaaaccattcgctcacgctgtcagccgctgcatttt
caccgcattcccaacgagcttctcaagcgtgacctggttcagcgcctggaaatcgatgat
gccgccggacacctgcttgccgcgctttccgacggcagctttcgcaaggccctggggcgt
gaccgcgagctgtttatcagcggccggcgtgattttctcaaagccgtgacggccctgtcg
cccggcagtgttctgcccctcttcgacctctcgcaggaactggccgaccaaaaggagcaa
cttccggaatacctcgagattctcgaagccttctatcgtgacctgttgctcagcctgcac
ggtcgcccggcggatgatctggtcaatatcgacctgctggagaaagtacggcgctgcgcc
gcgcgcgagacgccgggctcggtattgagtaaacttgaggctattcaggcggcccgccgg
cacctgaaccgcaacgtcaaccggcaactggccatggatcacctgttgctgcaactgtgc
gcatga
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