Geoalkalibacter halelectricus: L9S41_03495
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Entry
L9S41_03495 CDS
T09882
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
ghc
Geoalkalibacter halelectricus
Pathway
ghc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ghc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L9S41_03495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghc03021
]
L9S41_03495
Transcription machinery [BR:
ghc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L9S41_03495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Rrf2
DUF6285
Motif
Other DBs
NCBI-ProteinID:
UWZ80470
LinkDB
All DBs
Position
806471..807448
Genome browser
AA seq
325 aa
AA seq
DB search
MNDELSELEEVELEEEDSDDVDGGRDEEELEEEPEEAEEKPDYSDHSDDAIKLYLKEIQK
TKLLTAEEERELARRIAKGEMAARDRMIESNLRLVVKIAKRYMNRGLPFLDLIEEGNMGL
IKAVERFKLSKECRFSTYATWWIRQSIERALVNQSRTIRLPVHVSDDINKLIKISRELQQ
KLNREPQVKEVAEAMSVEPAYVRRLMVLVKKTYSIEHPMGENSDYSLMDTIEDSSAVDPS
GLVEDLEKFTRVQEWLATLSDSEREILSLRFGLDDREPQTLDTIGRKFGVTRERIRQIEA
KSLEKLRKIMEEGEESAKAAREEYR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatgaactaagcgaactcgaagaggtggaactcgaagaggaagatagtgacgat
gtggatgggggtcgcgacgaggaggagttggaagaggagcctgaagaggccgaggaaaag
cccgactacagcgaccactccgacgacgccatcaagctctatctcaaggaaatccaaaaa
accaagctgttgaccgcagaagaagagcgcgagctcgctcggcgcatcgccaagggtgag
atggcggcacgcgatcgcatgatcgaatccaacctgcggctggtcgtcaaaatcgccaag
cgctacatgaatcgcggcctgccgtttctcgacctgatcgaggagggcaacatgggcctg
atcaaggcggtcgagcggtttaagctgagcaaggaatgccgcttttccacctatgccacc
tggtggatcaggcagtccatcgagcgcgccctggtcaatcaaagccgcaccattcgcctc
ccggtgcatgtctccgacgacatcaacaagctgatcaaaatcagccgcgaattgcagcaa
aaactcaatcgcgagcctcaggtcaaggaagtggccgaggccatgagtgtcgagcccgcc
tacgtgcggcggctcatggtgctggtcaagaagacctactccattgagcaccccatgggt
gaaaacagcgattacagcctcatggacaccattgaggattcctcggccgtcgacccttcg
ggcctggtcgaggatctggaaaaattcacccgggtccaggaatggctggcgaccctgagc
gacagcgagcgagaaattctcagcctgcggttcggcctggatgaccgtgagccccaaacc
ctcgacaccatcggccgcaaattcggcgttactcgcgaacgcatacgccagatcgaggcg
aaaagccttgaaaagctgcgcaagatcatggaagagggcgaagagagcgccaaggcggcg
cgagaggaataccgctag
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