Geoalkalibacter halelectricus: L9S41_05670
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Entry
L9S41_05670 CDS
T09882
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ghc
Geoalkalibacter halelectricus
Brite
KEGG Orthology (KO) [BR:
ghc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghc03400
]
L9S41_05670
Enzymes [BR:
ghc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
L9S41_05670
DNA repair and recombination proteins [BR:
ghc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
L9S41_05670
Prokaryotic type
L9S41_05670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF7239
Motif
Other DBs
NCBI-ProteinID:
UWZ80891
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All DBs
Position
complement(1271753..1273219)
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AA seq
488 aa
AA seq
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MTPSSRLRRINQAPVNPRGEFILYWMIAARRTGWNFALQHAVAQARELNKPLIVLEALRC
DYPWASVRLHRFILDGMADNARSLRGKPVLYYPYVEEHRGEGQGLLETLSKRACLVVTDD
FPAFFLPRMIQAAGRRLTVRLEAVDGNGLLPLAAVPQDYPSAYAFRRFLQKNLPGHLTDL
PQADPLSDAQLPLLSTLPQEILERWPTAWAPLEEEDFSLPALPIDQQVATVDMPGGAVAA
GARLELFLDERLCDYADQRNQPERQVTSELSAYLHFGQISVHEIFARLAARENWNPGRLG
PERKGQRAGWWGMSANAEAWLDQLVTWRELGFNFCARRPDYDRYESLPAWAQATLDQHAR
DPRPYLYELHDFERAGTHDPLWNAAQRQLLREGSIHNYLRMLWGKKILEWSRDPRAALEI
MIELNNKYALDGRDPNSYSGIFWCLGRYDRPWPERPIYGKIRSMSSENTARKFSVDSYLR
HYARDPDA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaccccttcttcccgtctgcgccggatcaaccaagctcctgtcaatccaaggggcgaa
ttcatcctctactggatgatcgccgcgcgccgcacagggtggaatttcgccttgcagcat
gccgtcgcccaggcccgtgaattgaacaagccgctgatcgtccttgaggccctgcgctgc
gattatccctgggcgagcgtgcggctacaccgcttcattctcgacggcatggccgacaat
gcccggtccctgcgcggcaagccggtgctctactatccctatgtggaagaacaccgggga
gagggccaagggctgctcgaaaccctgagcaaaagggcctgcctggtggtcacggatgat
tttccggccttttttctgccccgcatgattcaggcggcgggccggcgcctgactgtgcgc
ctagaggcggtggacggcaacggcctgctgcccctggccgccgtcccccaggattatccc
agcgcctacgcctttcgccgctttttgcagaaaaacctgcccggccatcttaccgacctg
ccccaggccgatcccctgagcgatgcgcaactgcctctcctttccaccctgccgcaggag
attctcgagcgctggcccaccgcctgggcgccccttgaggaagaggatttctccctgcct
gccttgcccatcgaccagcaggtcgcgaccgtcgacatgcctggcggcgccgttgccgcc
ggagcgcggctggagttgtttctggacgagcgcctctgcgactacgccgaccagcgcaac
cagcctgaacgccaggtcaccagcgaactctccgcctatctgcacttcgggcagatttcc
gtgcatgaaatcttcgcccggctcgccgcgcgagagaactggaatccggggcgcctcggc
ccggaacgcaaggggcagcgcgccggttggtggggcatgtcggccaatgccgaggcctgg
ctcgatcaactggtgacctggcgcgaactgggcttcaacttctgcgcccggcgtcccgat
tacgaccgctacgagagtctgcccgcctgggcgcaagccaccctggaccagcacgcccgg
gatccacgcccctacctctacgagttgcacgacttcgaacgggcaggcacccatgatccg
ttgtggaacgccgcccagcgtcaactgctgcgcgagggcagcatccacaactatctgcgc
atgctctggggcaagaaaatccttgaatggagccgcgacccgcgcgcggcactggagatc
atgatcgaactcaacaacaagtatgccctcgacggccgcgaccccaacagctacagcggc
atcttctggtgcctgggccgctatgaccgcccctggcccgagcgccccatttacggcaag
atccgctccatgagttccgagaataccgcccgcaagttctccgtcgattcctacctgcgc
cactatgcgcgcgatcccgatgcgtga
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