Geoalkalibacter halelectricus: L9S41_06225
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Entry
L9S41_06225 CDS
T09882
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ghc
Geoalkalibacter halelectricus
Brite
KEGG Orthology (KO) [BR:
ghc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghc03021
]
L9S41_06225 (rpoH)
Transcription machinery [BR:
ghc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L9S41_06225 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
KORA
GerE
HTH_11
R3H
DUF6547
Motif
Other DBs
NCBI-ProteinID:
UWZ80987
LinkDB
All DBs
Position
complement(1396359..1397216)
Genome browser
AA seq
285 aa
AA seq
DB search
MSASYLPAVHDGLDHYMQQINRFDVLSRQQEYELAMRFRRRGDIEAAHRLICANLRFVVK
IANEYRGYGLKLLDLIQEGNIGLMLAVKKFDPERGIRLISYAVWWIRAYIHNYIIRTWSL
VKIGTTQAQKRLFFKLSQTRALLSNQEIEPESSQIAETLAVSDEEVEQMALRMSARDASL
NVELSEGSDYSLLDTLADERSNQEEQLVEKQQSRALSTQVRSALKILNPRERRIIHQRVL
SDSPRTLQEIADDYGISRERVRQVEQNAMRKMREHLEPTLAAGES
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctcctacttgccggccgtccacgatggccttgaccactacatgcagcagatc
aaccgcttcgacgtcctctcccgccagcaggagtacgaactggccatgcgctttcgccgg
cgcggcgacatcgaggcggcccatcgcttgatatgcgccaacctgcgctttgtcgtcaaa
atcgccaacgagtatcgcggctacggcctcaaactgctcgacctgatccaggaaggcaat
atcggcctgatgctggcggtcaagaaattcgaccccgagcgcggcattcggctgatctcc
tatgccgtctggtggatccgcgcctatatccacaactacatcattcgcacctggtcgctg
gtcaagatcggcaccacccaggcgcaaaaacgcctgtttttcaagctcagccaaacccgc
gccctgctcagcaaccaggagatcgaacccgagagttcccagattgccgaaaccctcgcg
gtcagcgatgaggaggtcgagcagatggccttgcgcatgagcgcccgcgatgcctctctc
aatgtcgaactcagcgaaggcagcgactacagcctgctcgacaccctggccgacgagcgc
agcaatcaggaagagcagctggttgaaaagcagcaaagccgcgccctttcaacccaggtg
cgctcggccctcaagatcctcaacccgcgcgaacggcgcatcatccaccagcgggtgttg
agtgattcgccgcgcactctccaggagatcgcggatgattacggcatcagccgcgaacgg
gtccgccaggttgaacagaacgccatgcgcaaaatgcgcgagcacctcgagccgaccctg
gccgcgggcgagtcctag
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