Geoalkalibacter halelectricus: L9S41_06265
Help
Entry
L9S41_06265 CDS
T09882
Name
(GenBank) class I SAM-dependent rRNA methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
ghc
Geoalkalibacter halelectricus
Brite
KEGG Orthology (KO) [BR:
ghc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghc03009
]
L9S41_06265
Enzymes [BR:
ghc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
L9S41_06265
Ribosome biogenesis [BR:
ghc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
L9S41_06265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUA_3
Methyltrans_SAM
Methyltransf_31
Methyltransf_25
Cons_hypoth95
MTS
Methyltransf_15
PrmA
TRM5-TYW2_MTfase
FtsJ
Methyltransf_11
Methyltransf_12
UPF0020
Methyltransf_23
Methyltransf_24
TRM
Methyltr_RsmB-F
PliI
PUA
Methyltransf_3
UPF0113
Motif
Other DBs
NCBI-ProteinID:
UWZ80995
UniProt:
A0ABY5ZSW3
LinkDB
All DBs
Position
complement(1403663..1404835)
Genome browser
AA seq
390 aa
AA seq
DB search
MKIILAAGRERRLLSGHPWVFSNEIQRVEGAPEPGDSVAVHSARGAFLGCGHYNPRSLIS
VRLLSSKPQDIDLPEFFQARIAQALAYRRATYGELDGVRLVYGESDFLPGLVVDRYGPVL
SLQFLSLGMDRRRDLIVAALQKLLEPRAVVARNDVGVRELEGLPQQVEVLAGEVPEQVMV
SENGLRFAVDILGGQKTGHFLDQKENHQALRDRVGDGRVLDLFCYSGAWAVHAAHYGARE
VLGVDISAAALALARGNAERNGLAERCRFTQGDVFEVLRDLAAQGERFDTIVLDPPAFVK
SKKRLAEAVRGYLTINRRAMELLAPGGFLFTCSCSYHMERELFLDTLRQAAAKANRTLRL
VEVRGQALDHPVLLACPETDYLKCVILQAL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcattctcgccgccggtcgcgagcggcgccttcttagcgggcacccctgggtg
ttcagcaatgaaatccaacgcgtggagggagcgccggaacccggcgacagcgttgcggta
cacagcgccaggggggcgttccttggttgcggccactataacccgcgttccctcatcagc
gtgcgcctgctgtcctcaaagcctcaagacatcgatctcccggaatttttccaagcgcgc
attgcccaggccctggcctaccgccgggccacctacggtgagctcgacggcgtacggctg
gtttacggcgaaagcgattttctacccggcctggtggtggaccgctatgggccggtgctg
tccctgcaatttctcagcctgggcatggaccggcggcgcgatctgatcgtcgcggcgctg
caaaagctgctggagccgcgggccgtggtggcacgcaacgatgtcggggtacgcgaactc
gaagggttgccccagcaagtcgaagtgctcgcgggggaggttcccgaacaggtcatggtc
agcgaaaacgggctgcggtttgccgtggacatcctggggggccagaaaaccggtcatttt
ctcgatcagaaggaaaatcaccaggccctgcgggaccgcgttggggacgggcgggtcttg
gatctgttttgctactcgggcgcctgggcggtgcatgccgctcattacggcgcccgcgag
gttctcggcgtcgatatctccgccgctgccctggccctggcgcgcggcaacgccgaacgc
aatggtctcgccgagcgctgccgcttcacccagggggatgttttcgaggttctgcgcgat
cttgccgcccagggggagcgcttcgacaccatcgtccttgatcccccggcctttgtgaaa
agcaaaaaacgtctcgccgaggcggtgcgcggctacctcaccatcaatcgtcgcgccatg
gaactgctggcgcccggtgggtttcttttcacctgctcgtgctcctaccacatggagcgt
gaactcttcctcgacaccctgcgccaggccgccgccaaggccaatcgcaccctgcgcctg
gtcgaagtgcgcggacaggccctggatcatccggtccttctggcctgccccgaaaccgac
tatctcaaatgcgtcatcctgcaggcgctgtag
DBGET
integrated database retrieval system
