Geoalkalibacter halelectricus: L9S41_07040
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Entry
L9S41_07040 CDS
T09882
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
ghc
Geoalkalibacter halelectricus
Pathway
ghc02020
Two-component system
ghc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ghc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L9S41_07040
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L9S41_07040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ghc02022
]
L9S41_07040
Two-component system [BR:
ghc02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
L9S41_07040
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
AAA_5
HTH_8
AAA
AAA_16
Mg_chelatase
nSTAND3
DNA_binding_1
nSTAND6
TP_0454_N
TIP49
MCM
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
UWZ81144
UniProt:
A0ABY5ZQM8
LinkDB
All DBs
Position
complement(1598042..1599385)
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AA seq
447 aa
AA seq
DB search
MILDKKRILLVDDDEDLLKLLAMRLTGNGYDVSLAQSGEEALALLPVIRPQLVITDLRME
GMNGLALFDAIRKSNTSLPVIILTAHGSIPDAVDATKRGVFTFLTKPINSRELLREVEKA
LSLSPGGGGDLPGQEWRREIITQSPLVEDLLRKALLAAASNSSVLIRGESGTGKELLARA
IHRASARAAQPFVAVNCGAIPDSLLESELFGHVKGAFTGADRNHAGLFRSADGGTLFLDE
IGDMPLALQVKLLRVLQEKQVRAIGSALATSINVRIISATHRVLEDEIKEGNFREDLYYR
LNVVSLELPTLAERREDIPLLANHFLHKVTSETGKKVGGISPEAMEVLISASWPGNIRQL
GNVVEQAVALSTSHLISADLIHNAIRETPEDIPSFADARRQFEQEYLVQLLKITNGNVSQ
AARLAKRNRTEFYKLLNRHHIVPTLFK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgattttggacaaaaaacgcattcttttggttgacgacgacgaggatctgctcaagctg
ctggccatgcggctcaccggcaacggctacgacgtcagcctcgcgcaaagcggcgaggaa
gccctggccttgctgccggtcatccgtcctcaactggtgattaccgatctgcgtatggaa
ggtatgaacgggctggcgctctttgatgccattcgcaaaagcaacacgtcgttgccggtg
atcattctgaccgctcacgggtcgattcctgatgctgttgacgccaccaagcgcggggtt
ttcacttttctcaccaagcccatcaacagccgcgaactgctgcgcgaggtggaaaaggcc
ctgagtctttcccccggcggagggggcgacctgcccggtcaggagtggcgccgggaaatc
atcacccagagtcccttggtggaagatttgctgagaaaggcgcttttggccgccgccagc
aactcgagcgtcctgatccgcggagaaagcggcaccggcaaggaactgctggcaagggcg
attcatcgcgccagcgcacgtgccgcccagccttttgtcgcggtgaactgcggcgcaatt
cccgatagtcttcttgagtcagagcttttcgggcatgtcaagggtgcctttaccggggct
gatcgcaaccatgccgggctgtttcgctcggccgatggcggcaccctgtttcttgacgag
atcggcgacatgccgctggctctgcaggtcaaattgctacgcgtgttgcaggaaaagcag
gtgcgggccataggttcggccctcgccaccagcatcaatgtgcggattatctcggcgacg
catcgggtgctcgaggatgagatcaaggaaggcaatttccgcgaagatctttattaccgc
ctcaatgtggtttctctggaattgcccaccctggccgagcggcgcgaggacattcccctg
ctggccaatcatttcctgcacaaggtaaccagcgagaccggcaaaaaagtcggggggatt
tcacccgaggccatggaggtgctcatcagtgccagttggccaggaaacatccgccaactc
ggcaatgtcgttgagcaggccgtggccctgtccacaagccacctgatctccgcggatctg
atccataatgctattcgcgaaacgcccgaggacattccctcctttgccgatgcccggcgt
cagttcgaacaggagtatctggtgcagttgcttaagatcaccaacggaaacgtcagccag
gccgcgcggcttgccaagcgcaaccgtaccgagttctacaaattgctcaaccgtcaccat
atcgtgccgactttgtttaaatag
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