Geoalkalibacter halelectricus: L9S41_07140
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Entry
L9S41_07140 CDS
T09882
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ghc
Geoalkalibacter halelectricus
Pathway
ghc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ghc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
L9S41_07140 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghc03400
]
L9S41_07140 (xseA)
Enzymes [BR:
ghc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
L9S41_07140 (xseA)
DNA repair and recombination proteins [BR:
ghc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
L9S41_07140 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
UWZ81164
UniProt:
A0ABY5ZRL8
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All DBs
Position
complement(1622180..1623379)
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AA seq
399 aa
AA seq
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MQQPLPVLSVSRLTALLKETVEDNFVRVLVEGEISNFSRPASGHYYFSLKDARAQMRGVM
FRAQNRLLPFIPEDGMQVVCAGRISLYEPRGELQLVVEAMEPKGVGGLQLAFEQLKARLA
EEGLFDAARKRPLPTFPRCVGVVTSASGAAIHDILNVLRRRGAGVRLVLRPALVQGASAA
ADIAAAIDEFNRHGEADVLIVGRGGGSLEDLWAFNEEIVARAVAGSGIPVISAVGHETDV
TIADFAADLRAPTPSAAAEMVAKSRLELEGHLDHLCLRLAAQMRARMAFLNERVQGLERR
LRSPAQQLKQWRDHEQLLEKRLQRAFDLALRQRRERLAAAAARLDALSPLAVLARGYAIV
FRDRDGSAVRRAAQVQIGDEVSIRLAQGRLRAKLTEVEE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccactgcccgtcctcagcgtttcgcgtctcaccgccctgctcaaggagacg
gtggaggacaactttgtccgggttctggtcgagggagaaatctccaacttttcccgaccc
gcctccggacactattatttttccctcaaggatgcgcgcgcccagatgcgtggcgtgatg
tttcgcgcccagaaccgcctgctgccctttattcccgaggacggcatgcaggtggtctgc
gccgggcgcatcagtctttacgagccgcgcggggagctgcaactggtggtcgaggccatg
gagcccaagggcgtgggcggcttgcagttggcctttgagcaactcaaggcgcgcctggcc
gaggaaggtttgttcgacgccgcccgcaagcggcccctgccgacctttccccgctgtgtc
ggggtggtgacttcggccagtggcgcggctattcacgatatcctcaatgtgctgcggcgg
cgcggtgccggggtgcgcctagtgctgcgccccgccctggtccaaggcgcgtcggccgcc
gcggatatcgccgccgccatcgacgagttcaatcgacacggcgaggccgatgtcctcatc
gtcgggcgcggtggcggcagcctcgaggatctctgggcctttaacgaagagatcgtagcg
cgtgccgttgccggctcgggcattccggtgatttccgccgtgggccatgaaacggacgtc
accatcgccgatttcgcggcagatctgcgtgctcccacccccagcgcggccgcggagatg
gtggccaaaagccggctggaactcgaagggcatctcgaccacctgtgtctgcgcctcgcc
gcgcagatgcgcgcacggatggcatttctcaacgagcgcgtgcagggattggaacgccgc
ctgcgctcccccgcgcagcagctcaagcagtggcgcgatcacgagcaactcctggaaaag
cgcttgcagcgcgcctttgatctggccctgcggcagcgccgcgagcggctcgccgccgct
gctgcgcgcctggacgcgctttcccctttagcggtcctggcgcgcggctacgccattgtg
ttccgggacagggacggcagcgccgtgcgccgtgctgcccaggtgcaaatcggtgacgag
gtcagcatccgtctcgcacaggggcgtctcagggccaaactcacggaggttgaagaatga
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