Geoalkalibacter halelectricus: L9S41_07735
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Entry
L9S41_07735 CDS
T09882
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
ghc
Geoalkalibacter halelectricus
Pathway
ghc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ghc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L9S41_07735
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ghc02022
]
L9S41_07735
02035 Bacterial motility proteins [BR:
ghc02035
]
L9S41_07735
Two-component system [BR:
ghc02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
L9S41_07735
Bacterial motility proteins [BR:
ghc02035
]
Pilus system
Twitching motility proteins
L9S41_07735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
PDE8A_N
Mg_chelatase
AAA
bpMoxR
AAA_3
AAA_7
HTH_50
AAA_2
nSTAND3
TIP49
AAA_22
DUF815
HTH_30
Motif
Other DBs
NCBI-ProteinID:
UWZ81270
UniProt:
A0ABY5ZQ17
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All DBs
Position
1751214..1752617
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AA seq
467 aa
AA seq
DB search
MERHLLENKEFRILVVDDEESLREVLTIMLHREGYRVDAASDGGHALACLNEKDYDLIIS
DIKMPRVSGFELLKHVRETAPETVMIMITAFSSTEEAVEAMKQGAYDYITKPFKNEEIRL
IVRNALERRSLRRESKQGKEEGGRRQTFGNLIGRSRPMQELYDLIEKVADTRVNVLITGE
SGTGKEVVAKAIHYNSDRRDMPFIPINCGAIPENLLESELFGHEKGSFTGAVSQKPGLFE
VANQGTLFLDEIGELPPMMQVKLLRVIQEREFRRVGGTKNIRCDVRVIAATNKDLEGEVK
IGAFREDLFYRLNVIRIELPSLRERREDIPLLVQHLYSKLTGREGFQIEETAMRRLLEYR
WPGNIRELENVIERCVVLGAADKLTAECLPLPLQATPATGGEALSTEIPDSGFDLDAYLG
NIEQEILHKALEKTGGVRKKAAELLGISFRSMRYRLAKFGISPDDDE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggagagacatctcttggaaaataaagaatttcgtattctcgtggtcgacgacgaagag
agcctgcgtgaagtgctgaccatcatgctgcaccgcgaaggttacagggtcgatgccgcc
tcggacggcggccatgccctggcgtgcctgaatgaaaaagattacgacctgatcatcagc
gatatcaagatgccgcgcgtgagcggttttgagctgctcaagcatgtgcgtgagacggcg
cccgaaacggtcatgatcatgatcaccgccttctcctccacggaggaagcggtcgaagcc
atgaaacagggcgcctatgattacatcaccaagcccttcaagaacgaggaaatccgcctc
atcgtacgtaacgccctggagcgccgctccctgcgccgggaaagcaagcagggcaaggaa
gagggggggcggcgtcagaccttcggcaacctcatcggccgaagccggcccatgcaggaa
ctctatgatctgatcgaaaaagtcgccgatacgcgggtcaacgtgctcatcaccggcgaa
agcggcaccggcaaggaagtggtggccaaggccattcactacaacagcgaccggcgcgac
atgccctttatccccatcaactgcggtgccattccggaaaacctgctggaaagcgaactc
ttcggccacgaaaagggctcttttaccggcgcggtcagccagaaacccggattgttcgaa
gtcgccaaccagggcaccctgtttctcgacgagatcggcgagctgccgcccatgatgcag
gtcaagctgctgcgcgtgattcaggagcgcgaatttcgccgggtcggcggcaccaaaaac
atccgttgcgacgtgcgcgtcatcgccgccaccaacaaggatttggaaggcgaagtcaag
atcggcgcttttcgcgaggatctcttctatcgcctcaacgtcattcgcatcgagctgccg
tccctgcgcgagcggcgcgaggatatccccctgctggtccaacacctctacagcaagctg
accggccgcgagggattccagatcgaagagacggccatgcgccggctgctcgaataccgc
tggcccggaaatatccgcgagcttgaaaacgtcatcgagcgctgcgtggtgctcggcgcc
gccgataagctcaccgccgagtgcttgcctctgcccctgcaggcaactcccgcgaccggc
ggggaagccttaagcaccgagatccccgacagcggctttgacctcgacgcctacctcggc
aacatcgaacaggaaatcctgcacaaagctctggagaaaaccggcggcgtgcgcaaaaaa
gccgccgaactgctcggcatctcctttcgctccatgcgctatcggctggctaaattcggt
atttcgccggatgatgatgagtga
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