Geoalkalibacter halelectricus: L9S41_08230
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Entry
L9S41_08230 CDS
T09882
Name
(GenBank) bifunctional oligoribonuclease/PAP phosphatase NrnA
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
ghc
Geoalkalibacter halelectricus
Pathway
ghc00920
Sulfur metabolism
ghc01100
Metabolic pathways
ghc01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ghc00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
L9S41_08230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghc03400
]
L9S41_08230
Enzymes [BR:
ghc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
L9S41_08230
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
L9S41_08230
DNA repair and recombination proteins [BR:
ghc03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
L9S41_08230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UWZ81367
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All DBs
Position
1860742..1861713
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AA seq
323 aa
AA seq
DB search
MNNGTIRAILERIESARRILVASHSSPDGDAIASTLALANALREMGREVVAFNADPVPQT
LQFLPGAASLVHDLRDVAPFDLGFLLDAGELRRAEAPLKELCATLINIDHHPYSEPFGEI
NYVDEKASATGALIYRVLKEGGHPISPDVALCVYTAILSDTGSFRYSNADSEAFRIAADM
VEQGGINPWDVAGGLYESQDEKRLRLLALALATLQVSACGKFASLTLTDEMMRRTGASHE
HTDGFVNYPRSIRGVEVAILFRQIGPDAYKVGFRSKGRVDVGALARQLGGGGHHNAAGAE
VQGALEEVRASVFSRLQIGSATD
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacggcacgatcagggcgattctggaaaggattgagtcggcgcgacgcatcctt
gtcgcatcgcattccagtcccgacggagacgccatcgcctcgaccctggctctggctaac
gccttgagggaaatggggcgcgaggtggtggccttcaatgccgatccggtacctcagacc
ttgcagtttctccccggtgcggcgagcctggtgcatgatctgcgcgatgtcgcgcccttc
gatctcggctttctcctcgatgctggcgaactgcggcgggccgaagcccccctgaaggaa
ctttgcgccacattgatcaacatcgatcatcatccctactcagagccgttcggcgaaatc
aattatgtggatgagaaggccagcgccaccggcgccctgatctaccgggtgctcaaggaa
ggcggtcatcccatctcgcccgacgtcgccttgtgcgtctataccgccattctttccgac
accggctcctttcgctactccaatgccgattccgaggcctttcgcattgccgcggacatg
gttgagcagggtggaatcaatccctgggacgtggccggcgggctttacgagagtcaggat
gaaaagcgcctgcgtctgcttgccctggcccttgcgacgctgcaggtttcggcctgcgga
aagttcgccagcctgaccctgaccgatgaaatgatgcgccgcactggagccagtcacgaa
cacaccgacggtttcgttaactatcctcgctccattcgcggcgtcgaggtggcgattttg
tttcgccagatcggtcccgatgcctacaaggtcggatttcgcagcaagggccgcgtcgat
gtcggtgccctggcccgccaattgggtggcggcggccaccataacgccgccggagccgag
gttcagggcgccctggaagaggtgcgcgcctcggttttttctcgcctccagatcgggtcc
gcgaccgattaa
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