Geoalkalibacter halelectricus: L9S41_08315
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Entry
L9S41_08315 CDS
T09882
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ghc
Geoalkalibacter halelectricus
Pathway
ghc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ghc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L9S41_08315 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghc03400
]
L9S41_08315 (recC)
Enzymes [BR:
ghc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
L9S41_08315 (recC)
DNA repair and recombination proteins [BR:
ghc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L9S41_08315 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UWZ81384
LinkDB
All DBs
Position
1875455..1878700
Genome browser
AA seq
1081 aa
AA seq
DB search
MSGFHLFLSNRLELLFEELAEVLSTAPAAVLTPEVILVQSRGMQRWLSLRLAERFGAWAN
DQGSFPFPNAFMRQCFRAVLPGLPDKSRFEPAPLTWSILACLPTLLARPEFAPVRAYLGA
APDPLKSYQFARRLADLFDQYTVYRPDLLRTWDRGLETADQAWQAHLWRELNAAADGPHK
AAMLHDFLAAARSSPEAAAHLPHRVAVFGIPAMPPMHLAVLEALALHLDVNLFLLNPSRE
YWGDIISAREAAKRKKQLSFDDLLDTDLYLGSGHPLLASLGGLGRDFFRLLLDRVEFEEH
LCFSDPQDDTLLHCLQSDILLLRHRPDGNAPVLNLDPGDNSVQVHSCHGPLREMEVLQDQ
LLALFERHPDLMPNDVLVMLPDVEAYAPYIGAVFGAENQGVPRIAFRIADRGLRAQSPVV
ETFLKLPALVGSRFGVSQVLDILENPAVYRRFGLSLADLDQIRDWIRQTRIRWGIDGADR
QRQDLPAYAESTWRAGLERLLLGYALPEDAGLFAEIFPHAVATGDQARVLGCFMDFTTAL
FDLAAGLAAPRSPQDWARCFEDVLEGFFTGDQGDPAFEDLRQALRQFRETARLAEFDAPL
PLEVARAHLSALLEERGTAQGFLAGGVTFCALLPMRSIPFRVIVLSGMNDGAFPRAERPP
GFDLMAHNPQPGDRSLRREDRYLFLEALVSARDYFILTYVGQNARDNSTAPPSVLVSELL
DCIAAGFLVPEGQVFDHLVRRHHLQAFHPAYFGEDQRLFSYSRANRDALAARLGATHCAA
VFSPVALPAPEDEITEVEVQALIRFVRHPQRYFLEERLGMCLPEQEEALEERETLVLEGL
ERYQLMMALIDEHLSGRADPGAYHRYRARALLPPGTPGEAAFAEADRAARAFVERLRPWR
AAAASFLEVDVDLGAARLCGRLVLGGVNGPLRYRYARLKARDRLAAWIAHLAVCAQRGET
CHTLLIGSEEICRFAGIAADQAQAWLRDVLELYARGQCRALHFFPESGAAFAAKVRAEQP
VESALEAARKVWHGSEQRRGESDDPWLRYSLRGAEPFTEEFCRLTLRIYAPLLSGLEEVR
A
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgagcggatttcatttgttcctcagcaaccggctggaattgctgttcgaggaattggcc
gaagtgctgagtaccgcgcccgccgcggtgctgacgccggaggttatcctggtccagagc
cgcggcatgcagcgctggctgtccctgcggctggccgagcgcttcggtgcctgggccaac
gaccaaggcagctttccctttcccaacgccttcatgcgccagtgttttcgtgccgttctg
cccggcctgccggacaagtcccggttcgagcccgcgcccctgacctggagcatcctcgcg
tgtttgcccaccctgctcgcgcgccccgaattcgccccggtgcgcgcctacctcggcgcc
gcgcccgacccgctgaagtcttatcagtttgcccgacggcttgctgatttgttcgaccaa
tacacggtctatcgccccgatctgctgcgcacctgggatcggggtctggaaaccgccgac
caggcctggcaggcccacttgtggcgcgagctgaacgcggctgcggatgggccgcacaag
gcggccatgctgcacgattttctcgcggcggcccgatcctccccggaagccgccgcgcac
ttgccccaccgcgtggcggtcttcggcattcccgccatgccgcccatgcacctggcggtc
ctcgaagcgctcgcgctgcatctcgacgtcaatctgtttctactcaacccctcgcgcgaa
tactggggcgacatcatctcggcgcgcgaagccgccaagcgtaagaagcaactcagcttc
gatgatcttctcgacaccgacctgtacctgggcagcggccatcccctgctcgcttccctg
gggggactggggcgggatttcttccggctgctcctcgaccgggtggaatttgaggaacat
ctgtgtttcagcgatccccaggatgacaccctgctgcactgcctgcaaagcgacatcctg
ctgttgcgtcaccgacccgatggcaatgcgccggtcctgaacctggaccccggggacaac
tcggtgcaggtgcactcctgccatggtcccttgcgcgagatggaagttctacaggatcaa
ctgcttgccctctttgagcgccaccccgacctgatgcccaacgacgtgttggtcatgctt
cccgacgtcgaagcctacgctccatatattggtgccgttttcggggccgagaaccaaggg
gtgccgcgcattgcctttcgcatcgccgaccgcggattgcgcgcccagagcccggtggtg
gaaaccttcctcaagctgccggccctggtcggcagccggttcggcgtctcccaggttctc
gacattctggaaaatcccgcggtttaccggcgctttggcttgtcccttgccgatctggac
caaattcgggactggatccgccagacccgcatccgctggggcatcgacggcgccgaccgg
cagcgccaagatctgcccgcctacgcggagagcacctggcgcgccggactcgaacggcta
ttgctcggctatgccctgcccgaggacgccggtctgttcgccgagatctttccccacgcc
gtggcgactggggaccaggcgcgcgtgctgggctgtttcatggatttcaccacggcgctt
ttcgatttggccgccggcctggcggcgccgcgctcgccccaggattgggcgcggtgtttc
gaggacgttctggaggggtttttcaccggcgatcagggcgatccggcgttcgaggatctt
cgccaggccttgcgccaatttcgcgaaaccgcgcggttggccgaattcgacgcgcctttg
cccctggaggtggcgcgcgctcatctcagcgcactgctggaagagcgcggcaccgcccaa
ggttttctcgccgggggcgtgaccttttgcgccctgctgcccatgcgcagcattcctttt
cgcgtgatcgtgctctccggtatgaacgacggcgcttttccccgcgccgagcgcccgccc
ggattcgatctcatggcccacaatccccagccgggcgaccgctccctgcgccgcgaggat
cgctacctgttcctggaggccctggtctcggcgcgtgactatttcatcctcacctacgtc
gggcaaaacgcccgcgacaacagcactgcgccgccttcggtgctggtgagcgaattgctc
gactgcatcgccgccggctttctggtgcccgagggccaggtgttcgatcacctggtgcgc
aggcatcacctgcaggcctttcacccggcgtacttcggcgaggatcaacgcctgttcagc
tattcgcgcgccaaccgtgatgctctggcggcgcgcctaggcgccacgcactgcgccgcg
gttttctcaccggtcgctctgccggcgcctgaggatgaaatcaccgaggttgaagtacag
gccctgatccgttttgtgcgccatccgcagcggtattttctcgaagagcggctcggcatg
tgcctgcccgagcaggaagaggctctggaagagcgcgaaactctggtcctggaggggctc
gagcgctatcaattgatgatggcgctcatcgatgaacacctcagcggccgcgccgacccc
ggtgcctaccatcgctaccgcgcccgtgccctgttgccgcccgggacgcccggcgaggct
gccttcgccgaagccgaccgcgcggcgcgcgccttcgtcgaacgcctcaggccctggcgc
gctgccgccgcgtcgttcttggaggtggatgtggatctcggtgccgcccggttgtgcgga
cgtctcgtcctgggcggcgtcaacggccccttgcgctaccgttacgcgcgtctcaaggcc
cgcgatcggctcgccgcctggatcgctcatctggcggtgtgcgcgcagcgcggcgagact
tgccacaccttgctcatcggcagcgaagagatctgccgtttcgcgggaatcgcagcggat
caggcgcaagcctggcttagggatgtgctggaactttacgcgcgcggacagtgccgggcg
ctgcactttttccccgaatccggcgcggcttttgccgccaaggtgcgcgccgagcagccc
gtggagagcgccctggaggcggcgcgcaaggtctggcacggcagcgagcaacggcgcggg
gagagcgacgatccctggctgcgctacagcctgcgcggcgccgagcccttcaccgaggag
ttttgccgtctgaccctgcggatctatgcgcccttgctcagcgggctcgaggaggtgagg
gcatga
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